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SCNpilot_expt_500_bf_scaffold_7961_10

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(11338..11955)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4A755 similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 198.0
  • Bit_score: 379
  • Evalue 2.10e-102
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 198.0
  • Bit_score: 375
  • Evalue 5.50e-101
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 198.0
  • Bit_score: 359
  • Evalue 7.00e-97

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
GTGAGAAGCTGCACGGCGTGGACGTCGAAGTTCGACGAGACGATCGAGATCGCGCTGAACCTCGGCGTCGATCCGCGCCACGCCGACCAGATGGTGCGCGGCGTCGTCACGCTGCCCGCCGGCACCGGCAAGACGGTGCGCGTCGGCGTGTTCGCCAAGGGCGCGAAGGCCGATGAGGCGCGCGCCGCCGGTGCCGACGTCGTCGGTGCGGAAGACCTGATGGAGACGATCCAGGGCGGCACGATCGATTTCGACCGCTGCATCGCGACCCCGGACATGATGGGCGTCGTCGGCCGTCTCGGCAAGGTGCTCGGCCCGAAGGGCCTGATGCCGAACCCGAAGCTCGGCACCGTGACGATGAACGTCGCCGAGGCGGTGAAGGCGGCCAAGGGCGGCCAGGTGGAATATCGCGTCGAGAAGGCCGGCATCATCCACTCCGGCATCGGCAAGGCGAGCTTCGCCGCCGAGGACCTGCGCCGCAACTTCGACGCGCTGGTCGACGCGGTGGTGAAGGCCAAGCCGTCGGGCGCCAAGGGCAAGTATGTCCGCAAGATCGCCGTCAGCTCCACGATGGGGCCGGGCATCAAGGTGGACGTGGCGGAGGTCGCCGGCGCCTGA
PROTEIN sequence
Length: 206
VRSCTAWTSKFDETIEIALNLGVDPRHADQMVRGVVTLPAGTGKTVRVGVFAKGAKADEARAAGADVVGAEDLMETIQGGTIDFDRCIATPDMMGVVGRLGKVLGPKGLMPNPKLGTVTMNVAEAVKAAKGGQVEYRVEKAGIIHSGIGKASFAAEDLRRNFDALVDAVVKAKPSGAKGKYVRKIAVSSTMGPGIKVDVAEVAGA*