ggKbase home page

SCNpilot_expt_500_bf_scaffold_11313_5

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3758..3943)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 60.0
  • Bit_score: 98
  • Evalue 3.90e-18
16S rRNA methyltransferase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C1E91 similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 59.0
  • Bit_score: 99
  • Evalue 1.60e-18
16S ribosomal RNA methyltransferase RsmE similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 60.0
  • Bit_score: 97
  • Evalue 1.50e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
ATGCGACCGGGCGCGGCGGCGATCCTGATCGGCCCGGAAGGCGGATTCGACGACGAGGAGCGCGCGTTGATCCGCGCGACGCCCGGCGCGGTGGCGATCTCGCTCGGGCCGCGTATCCTCCGCGCCGATACCGCCGCCGCCGCCGCCGTCTCCATATGGATGGCGAGCGCGGGGGACTGGCGGTAA
PROTEIN sequence
Length: 62
MRPGAAAILIGPEGGFDDEERALIRATPGAVAISLGPRILRADTAAAAAVSIWMASAGDWR*