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SCNpilot_expt_500_bf_scaffold_11797_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3..593)

Top 3 Functional Annotations

Value Algorithm Source
response regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD582 similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 172.0
  • Bit_score: 199
  • Evalue 2.80e-48
Response regulator receiver {ECO:0000313|EMBL:EZP48888.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 140.0
  • Bit_score: 183
  • Evalue 2.20e-43
response regulator receiver similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 143.0
  • Bit_score: 148
  • Evalue 2.30e-33

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGCGCTGCATGGGGCGCTGGTCTGACGGGCGGCTCGGCATGACGTGGCTGATACATTGCTTGCGTTGCATGCGCGAAAAAATTTGCGTCGAAAGTGCAATCGCGGCGTTAAGGCGCTGGGGTTTGGCAGGCGGCATGATTCACACGATGTTGTTCGAGCGGAAAAAGCGGCGGATCACGCGCCTCCTGCTGGTCGAGGACGAGCCGCTCGTCGCGTTCGATGCCGAGCATCTGCTGATCGCGGAACATTATGAGGTGATCGCCACCGTCGATCGCGTCGCGCGGGCGGTGGCGATTATCGGTGACGGGCGGGCGATCGATCTCGTGCTGGTCGATGTGGAACTGGCCGACGGCAGCGGCGTGGACGTGGCGCGGGCGGCGGCCGGGCGCGGCATCCCGGTGCTGTTCGTCACCGCCAATTGCCCGGCCGAGGCTTCGGCGCTCGCGGTCGGCTGCCTCGTCAAGCCGTTCGCCCAGCGTGACCTGCTGGCGGCGATCCGCGCGATCGAGGCGACGCTGGATGGCGCCGCGCCGCGCCGCCTGCCGAGCGGTTTCCGCCTGTTCGCGCAGGCCGGCTTGTCCGAACCCGAC
PROTEIN sequence
Length: 197
MRCMGRWSDGRLGMTWLIHCLRCMREKICVESAIAALRRWGLAGGMIHTMLFERKKRRITRLLLVEDEPLVAFDAEHLLIAEHYEVIATVDRVARAVAIIGDGRAIDLVLVDVELADGSGVDVARAAAGRGIPVLFVTANCPAEASALAVGCLVKPFAQRDLLAAIRAIEATLDGAAPRRLPSGFRLFAQAGLSEPD