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SCNpilot_expt_500_bf_scaffold_11797_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 646..1536

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 296.0
  • Bit_score: 361
  • Evalue 1.20e-96
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 221.0
  • Bit_score: 341
  • Evalue 2.20e-91
pseudouridine synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7990A similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 345.0
  • Bit_score: 379
  • Evalue 3.00e-102

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGATCGAGGAGGGTCGCGTCGCGAAGGACGGCGCGACGATCGAGACGCCCGCGACCTTGCTCGCCTCGCTCCATGGCGTGACGGTCGACGGCCAGCCGGTCGCGGCGGCGGTGCCCGCGCGACTGTTCCTGTTCCACAAGCCGGCCGGCGTGCTCACCACGGAGCGCGATCCGCGCGGCCGGCCGACAATCTACGACCGCTTGCCCAAGGACCTGCCGCGCCTCGTGCCCATCGGCCGACTCGATTATAGTACCGAGGGCCTGCTGCTGATGACCAACGACGGCGAGTTGAAGCGGCAGCTGGAGCTGCCCTCGACCGGCGTGGAGCGCGCCTATCGCGCGCGCGCCTTCGGCCAGGTGTCGCAGCCGCAGCTCGAATCGCTGATCGAGGGCGTGGAGATCGACGGCGTCCGCTACGGCTCGATCGACGCGAATATCGAGCGGCGCACCGGCGCGAACCTGTGGATCGAGATGATCCTGACCGAGGGCAAGAATCGCGAGGTCCGCCGCGTGCTCGAGCATCTCGGGCTGGAGGTTAACCGGCTGATCCGCATCCGCTACGGCCCGTTCGTGCTCGGCGATCTGCCGGCCGGCGGCATCGGCGAGGTACGGCAGCATGATCTGGTCGCCTTCCGCCAGTCGCTCGACCGCAAGGGGCCGAAGCCCGAACCGATCGCGGTCTCAACCGACGCGTCACCGGCACGACGCGCGCCCCGCCGCGCGCCGACCGCACCGCGCAAGCCGGCCGAAACGCGCAAACCGGCCGAAGCGCGCGTCGAAACACCGACCCCGACGGCGGAACGCCCCGCCCGTCCGGCACGTCCGCCGCGCCGCAAGACCGGCTGGGCGAAGCCCAAGCCACGCTCCGGCCCGGCGAGACCGCGCAAATGA
PROTEIN sequence
Length: 297
MIEEGRVAKDGATIETPATLLASLHGVTVDGQPVAAAVPARLFLFHKPAGVLTTERDPRGRPTIYDRLPKDLPRLVPIGRLDYSTEGLLLMTNDGELKRQLELPSTGVERAYRARAFGQVSQPQLESLIEGVEIDGVRYGSIDANIERRTGANLWIEMILTEGKNREVRRVLEHLGLEVNRLIRIRYGPFVLGDLPAGGIGEVRQHDLVAFRQSLDRKGPKPEPIAVSTDASPARRAPRRAPTAPRKPAETRKPAEARVETPTPTAERPARPARPPRRKTGWAKPKPRSGPARPRK*