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SCNpilot_expt_500_bf_scaffold_13408_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3..884)

Top 3 Functional Annotations

Value Algorithm Source
type IV secretory protein VirD4 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCEC1 similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 294.0
  • Bit_score: 532
  • Evalue 2.70e-148
IncW plasmid conjugative protein TrwB (TraD homolog) {ECO:0000313|EMBL:CCW16977.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 294.0
  • Bit_score: 530
  • Evalue 1.90e-147
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 294.0
  • Bit_score: 527
  • Evalue 2.80e-147

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
GTGCGGCTGCCGTTCGCGGCGCGCAAGGCGGCGGGAATCCATCACCCGTACAGCCTGGCCGGCATCGCCTATCCCTACCGGCTCGAGCAGAGCCATACGATGATCATCGGCACGACCGGCGCGGGCAAGACGACCGAGCTGCGGCGGCTGGTGACGCAGCTGCGCGAACGGCAGGACACCGCGGTCGTCTTCGACCTGACCGGCGCCTATGTCGAAAGCTTCTACGACCCCGCGCACGACACCATACTCAACCCAATGGACCAGCGCTGTCCGGCCTGGTCGATCTTCGCCGATTGCACGACGCATAGCGAGTTCACGGCCGCGGCGGCGGCGCTGATCCCGGCCGACGGCGGCTCGTCCGAACCCTTCTGGGCGCTTGCCGCGCGCACGCTGTTCATCGAGATGTGCGTAAAGCTGCAGGAGGGCGGCGCGACGACCAATCTGGCGCTGTCCGAGAACCTGATGACCGCCGATTTGAAGCGCGTGCATCGCTTCCTCGCGAACACCATTGCCGACCCGCTGACCGCGCCGGAAGCCGCGCGCATGGCGGAGTCGATCCGGGCGGTGTTCAACACCAATGCACAGGTGCTTCGCTTCCTGCCCGACGAGGGGCCGCGCTTCTCGATCCGCGACTGGATCACCGGCGACAAGCAGCCCGGCAGCATCCTGTTCGTCACCTCCAACTATGTCGATCTGCCGATGAACCGGGCGCTGCTGACGCTGTGGATGGACCTTGCGATCAACCGGTTGATGACGCTGCCGCGCACCCGCTCATTGCGAACGTGGTTCCTGTTCGACGAGCTGGGCGCGCTGCACCGCCTGCCGGCGATCGAGAACGGACTCCAGACCGCGCGTTCGTTCGGCGGCGCAATGGTGCTGGGA
PROTEIN sequence
Length: 294
VRLPFAARKAAGIHHPYSLAGIAYPYRLEQSHTMIIGTTGAGKTTELRRLVTQLRERQDTAVVFDLTGAYVESFYDPAHDTILNPMDQRCPAWSIFADCTTHSEFTAAAAALIPADGGSSEPFWALAARTLFIEMCVKLQEGGATTNLALSENLMTADLKRVHRFLANTIADPLTAPEAARMAESIRAVFNTNAQVLRFLPDEGPRFSIRDWITGDKQPGSILFVTSNYVDLPMNRALLTLWMDLAINRLMTLPRTRSLRTWFLFDELGALHRLPAIENGLQTARSFGGAMVLG