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SCNpilot_expt_500_bf_scaffold_17283_4

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 2494..3348

Top 3 Functional Annotations

Value Algorithm Source
periplasmic sensor hybrid histidine kinase; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 282.0
  • Bit_score: 196
  • Evalue 1.40e-47
histidine kinase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9318 similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 283.0
  • Bit_score: 277
  • Evalue 1.20e-71
Gellan polysaccharide biosynthesis regulator protein {ECO:0000313|EMBL:EZP48908.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 287.0
  • Bit_score: 290
  • Evalue 3.20e-75

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGGCTTCCCGATCGCCCGTTTCCCCGACCCTGCTCACCCCACGAACGGCATTGCCGATCGCGGCGGCGGCGGCGCTGCTCGCGGCCTTGCTCGTGCTGTGGCTGGTGGGGAACCGCGTGTTCGCCGCCGGCTTCGGCGCGAGCGCGATCGTGGTGGTCGGCGCGGTGATCGCATGGCGCTCGCTGGGGCAGGGACGCGATGAGGCCGATAGCGAGCCGGATTGGGGCCTTGCCCGCGCCGTAACGCAGACCTCGCGCGACGCGGTGGCGATCACCGATCGCGGCGGGCGGCTGGTCTGCGCCAACGACCTTTATGAAACCCTGTTCGGCGGCTTCCCGACGCCCCCCGACCTGACGGCGAAGGAAGGGAGCGTGTCGGCGCTTGCCTCCGCCGGACGCGCGGCATGGCGCGACGGCGAGGCGCAGGTGGCGCAACTCCGGCTCGATCGCCAGACGGTGAGCGTGGAGATCACCCGCGCCGGGGACCGACAGGACATGCTGATCTGGCGCTTCGAGCGCGCGGCCGACGCCAACCGCGTCGACCGGCTCACCGATGCGCTGGCGGGCGATCTCGGCGACCGGCTCGGCGCGGCCGGGATCATGGCGGCGATGATCGCGCCGGACGGCCACATCCTCGCGGCCAATCCAGTCTTTTCGCACCGCGCCCTCGGCCGGATCGAGGGCAGGGTGGAGGGTATGGACTTCGCCCGCTTCCTCATCACCGACAGCCGCGGGCTGGTGCGCTTCGAGCGCGAGGGGCTGGACGGCAATCCGCTGCGGCTCGTGCAGGTGCCGTTTGCCGACGGCGACGGCGGCCCGATCCTGATCGCGATGCTCGACGACGAGGAAGCGCCC
PROTEIN sequence
Length: 285
MASRSPVSPTLLTPRTALPIAAAAALLAALLVLWLVGNRVFAAGFGASAIVVVGAVIAWRSLGQGRDEADSEPDWGLARAVTQTSRDAVAITDRGGRLVCANDLYETLFGGFPTPPDLTAKEGSVSALASAGRAAWRDGEAQVAQLRLDRQTVSVEITRAGDRQDMLIWRFERAADANRVDRLTDALAGDLGDRLGAAGIMAAMIAPDGHILAANPVFSHRALGRIEGRVEGMDFARFLITDSRGLVRFEREGLDGNPLRLVQVPFADGDGGPILIAMLDDEEAP