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SCNpilot_expt_500_bf_scaffold_17565_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(22..561)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 177.0
  • Bit_score: 264
  • Evalue 1.60e-67
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 177.0
  • Bit_score: 241
  • Evalue 2.40e-61
Peptide deformylase n=1 Tax=Sphingomonas sp. S17 RepID=F3WST7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 177.0
  • Bit_score: 264
  • Evalue 1.10e-67

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGTCCTTGCTCTCGATCGTTGAAATCCCCGATCCCCGCCTGCGCCTCGTCTGCGAGCCCGTGGAGGCCGTGGACGACGAGGTGCGCACGCTCGTCGCCGATATGTTCGAGACGATGTACGCCGCGCACGGCATCGGCCTCGCCGCGAGCCAGGTCGGCGTGATCCGCCGCGTGATGGTGGTCGACCTTCAGGAGCGCGAAACCGAGGAAGAAGACGCCAAGCCGGAGGCGAAGCGCGATCCCCGTGCCTTCATCAACCCGGAAATCCTCTGGGTCAGCGACGAGAAATCGACCTATAACGAAGGGTGCCTGTCGATTCCCGAGCAATATGCCGAGGTCGAGCGCCCCGCGCGCTGCCGCGTGAAGTGGCTGGACGAGCAGGGCAAGGCGCACGAGGAAGAATTCCACGGCCTGATGGCGACGTGCGTGCAGCACGAGATCGACCACCTCAACGGCGTGCTGTTCATCGACCATATCTCGCGCCTCAAGCGCCAGATGCTGATCAAGAAACTCGACAAGGCGCGCAAGGCGGCGGCCTGA
PROTEIN sequence
Length: 180
MSLLSIVEIPDPRLRLVCEPVEAVDDEVRTLVADMFETMYAAHGIGLAASQVGVIRRVMVVDLQERETEEEDAKPEAKRDPRAFINPEILWVSDEKSTYNEGCLSIPEQYAEVERPARCRVKWLDEQGKAHEEEFHGLMATCVQHEIDHLNGVLFIDHISRLKRQMLIKKLDKARKAAA*