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SCNpilot_expt_500_bf_scaffold_29325_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(2..598)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 199.0
  • Bit_score: 364
  • Evalue 7.20e-98
topA; DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 199.0
  • Bit_score: 347
  • Evalue 2.60e-93
DNA topoisomerase 1 n=1 Tax=Sphingomonas sp. S17 RepID=F3WU64_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 199.0
  • Bit_score: 363
  • Evalue 1.50e-97

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Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGCAGCTCGTCATCGTCGAATCGCCGGCCAAGGCGAAAACCATCGAGAAATATCTCGGCGCCGATTATCGCGTCCTCGCGAGCTACGGCCATGTCCGCGATCTGCCGCCGAAGGACGGATCGGTCGATCCCGACGACGGCTTCGCGATGGAATGGGAGAATTACGCCGACAAGGCCAGGCAGCTGAAGGCAATCGCCGACGAGGCGAAGAAGGCCGATCGCCTGATCCTCGCCACCGACCCCGATCGCGAGGGCGAGGCGATCTCGTGGCACGTCCGCGAGGTGCTGCGCAGCCGCAAGGCGCTGCCCGACAAGGTGGAGCGCGTCACCTTCAACGCGATCACCAAGCCCGCCGTGACGGCGGCGATGGCCGCCCCGCGCGACCTCGATACCGACCTGATCGACGCCTATAAGGCGCGGCGCGCGCTCGATTATCTGGTCGGCTTCACGCTCTCGCCCGTGCTGTGGCGCAAGCTGCCGGGGGCGAAATCGGCGGGGCGCGTGCAATCGGTCGCACTGCGCCTGATCGTCGATCGCGAGCGCGAGATCGAGGCGTTCAAGTCGCAGGAATATTGGTCGGTCACCGCGACGATGGAG
PROTEIN sequence
Length: 199
MQLVIVESPAKAKTIEKYLGADYRVLASYGHVRDLPPKDGSVDPDDGFAMEWENYADKARQLKAIADEAKKADRLILATDPDREGEAISWHVREVLRSRKALPDKVERVTFNAITKPAVTAAMAAPRDLDTDLIDAYKARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLIVDREREIEAFKSQEYWSVTATME