ggKbase home page

SCNpilot_expt_500_bf_scaffold_29826_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 3..992

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S9Y9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 335.0
  • Bit_score: 332
  • Evalue 6.10e-88
TonB-dependent receptor {ECO:0000313|EMBL:GAO55715.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 329.0
  • Bit_score: 468
  • Evalue 7.60e-129
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 335.0
  • Bit_score: 332
  • Evalue 1.90e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
TTCCGCGGCACGCTTTCCAAGGCCGTCCGCGCGCCGAACATCGGCGAACTCTACGGCGCGCCTTCCCAGACGTTCGAGTTCTTCGACGATCCCTGCATCGTCGGCAACCGTGGGCTGGGCAAATCCACGCGACCGGCCAATTGCCAGGCGATCCTTTCCGCCGCCGGTCTCGATCAGGAGGCGATCGACAATTTCGAAGATCCCCGGAACACCAACATCCCGGGCGTCCAGAGCGGCAATGCCAAACTGGCACCGGAAGAAGCGCGGACGTGGACAGCGGGCGTCGTGCTTCAGCCGCGCTTCATTCCCGGCCTGCAACTGTCGCTCGACTGGTATAACATCAACCTGAAGAACGCGATCAACACGGTCGACCCGCAGCAGCTTGCCGAGCTGTGCGTGGATCAGGCCACGATCAACAACCAGTTCTGCTCCAGCATCCAGCGCCAGAGCGGCACCGGCCTGATCACCGGCTTCACCGTGTTCCCGCAGAACGTGGCGAGCTTCAAGACCGCCGGTCTCGATCTGAACCTGAACTATCGCTTCCTGATCGAGAAGATCGGCACGTTCAACATCAAGGTCGTGGGCAATTATCTCAACAAGCTGACGTTCGTCGGCACGCCGGGCGCGGAGCCAACCGACGAGCAGGGCACGGCATATAACGGATACATGCCGAAATATCAGGCATATACGACGATCACCTACCAGTCCGGCCCGTTCACGTTCAACTACAGCCTGTCGTGGTGGGACAAGACGCTGCGCTATTCGAAGGACACGATGGCCGGCAATCCGAACTACGTCGCTCCGCAATATGCCTATTTCAAGGATCGCTGGGTCCACAGCATCTATGCGAGCTTCGACGTGACGCAGGCGTTCCAGTTCTACGGCGGCGTGAACAACCTGTTCAACCAGAAGTCCGATCTCGGCTCGATCGCGAACCCCGTCGACCGGGTCGGCGCTACGATGTTCGCTGGCGCGCGCGTCAAGTTCTGA
PROTEIN sequence
Length: 330
FRGTLSKAVRAPNIGELYGAPSQTFEFFDDPCIVGNRGLGKSTRPANCQAILSAAGLDQEAIDNFEDPRNTNIPGVQSGNAKLAPEEARTWTAGVVLQPRFIPGLQLSLDWYNINLKNAINTVDPQQLAELCVDQATINNQFCSSIQRQSGTGLITGFTVFPQNVASFKTAGLDLNLNYRFLIEKIGTFNIKVVGNYLNKLTFVGTPGAEPTDEQGTAYNGYMPKYQAYTTITYQSGPFTFNYSLSWWDKTLRYSKDTMAGNPNYVAPQYAYFKDRWVHSIYASFDVTQAFQFYGGVNNLFNQKSDLGSIANPVDRVGATMFAGARVKF*