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SCNpilot_expt_500_bf_scaffold_1278_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(3140..3634)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 159.0
  • Bit_score: 273
  • Evalue 1.80e-70
Peptide deformylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMI4_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 159.0
  • Bit_score: 273
  • Evalue 1.30e-70
polypeptide deformylase similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 159.0
  • Bit_score: 273
  • Evalue 4.00e-71

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
GTGCCCGCCCTTCCCATTATCCGCTTTCCCGATCCGCGGCTGCGCACTGCCTGCGCGCCGGTGGCCGCCTTCGACGACGATCTGCACATACTTGCGAGCGATCTTCTGGATACGATGCGAGCTGCGCCCGGTGTCGGCATCACCGGCCCGCATATCGGCATTCTCAAGCGAGTCGTCGTGATCGAACTCAGCCGCGAGGACGGTGTGCGGACCTATATCAACCCGGAGGTCCTGTGGTCGTCGGAGGAGACGATGCGGCATATGGAAGGTAGCGTTTCCATGCCGGGAGCGACGGAGGAAGTCGTCAGGCCGAAATCTATCCGCTTTCGTTATCAGACGATCGATGGCGAACTGCGCGAAGAGGATGCGCATGATTTTCTGGCCAGCTGCATCCAGCACGAGATCGACCAACTAGACGGCATTTTCTGGCTGCAGCGGCTTTCCAAGCTGAAGCGCGACCGACTCGTGAAGAAATGGGAAAAGTTGCGCGCCTGA
PROTEIN sequence
Length: 165
VPALPIIRFPDPRLRTACAPVAAFDDDLHILASDLLDTMRAAPGVGITGPHIGILKRVVVIELSREDGVRTYINPEVLWSSEETMRHMEGSVSMPGATEEVVRPKSIRFRYQTIDGELREEDAHDFLASCIQHEIDQLDGIFWLQRLSKLKRDRLVKKWEKLRA*