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SCNpilot_expt_500_bf_scaffold_1058_12

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(12865..14277)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici C similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 470.0
  • Bit_score: 891
  • Evalue 6.80e-256
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNM4_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 470.0
  • Bit_score: 891
  • Evalue 4.80e-256
  • rbh
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 470.0
  • Bit_score: 891
  • Evalue 1.50e-256
  • rbh

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGATCCCCATCACCACGCTGAACGGAAAGAAGGTCGCTCTCTTCGGCCTCGGCGGCTCAGGCTTTGCCACGGCGCGCGCGCTGGTTGCCGGTGGTGCCGATGTCACGGCTTGGGACGACAATCCGGACAGCGTGGCCAAGGCGGCGGCCGAGGGGATCGCGGTTGCTGATCTCAGGACGATCGATTGGAACGGCCTTTCGGTGTTCGTTCTATCGCCCGGCGTGCCGCTGACGCATCCGAAGCCGCACTGGACCGTCGATCTCGCTCACGCCGCCGGCGTGGAGATCATCGGCGATGTCGAGCTTTTTGTCAGAGAACGGCGGGCGTTTGCGCCGGATTGCCCGTTCATCGCCATTACCGGAACAAATGGCAAATCGACGACGACGGCATTGATCGCCCATATCCTGCAATCGAGCGGTCGCGACACGCAGCTTGGCGGCAATATCGGTACGGCCGTGCTGACGCTCGACCCACCGAAAGCCGGCCGTTTTTATGTCGTCGAATGCTCTTCTTATCAAATCGATCTGGCACCGACGCTCAATCCTTCGGCCGGTATCCTGCTGAACCTCACGCCCGATCATCTCGATCGCCATGGTACGATGCAGCACTATGCCGACATCAAGGAGCGGCTTGTTGCGGGAAGCGATGTCGCCGTCGTCGGCGTCGATGACAGCTACTCCTCCTTGATCGCCGATCGGATCGAGCGGGCAGGTATCAAGGTGATGCGGATTTCGCGCCGGCATCCGTTGGCGAACGGCCTTTATGCAGAGGGCAGCCGTATCATTCAGGCATCGAACGCAGCGGCAGCCGAGATCGCCGATCTCGACGGCATCCAGACCTTACGTGGCGGCCATAACGCACAGAACGCGGCGGCTGCGATTGCAGCCTGCCTTGCAGTCGGCGTTTCCGCCGAGGAGATCAGGGCAGGGCTGAAATCCTTCCCGGGCCTCAAGCATCGCATGCAGCCTGTGGGGAAGCGCGGCCGGGTCGTCTTCGTCAACGACTCCAAGGCGACGAATGCAGATGCAGCAGCGCCGGCGCTTTCGAGCTATGAGAATATCTACTGGATCGCAGGCGGCCTGCCGAAAGAGGGCGGGATCACGAGTCTCGCGCCGCTCTTCCCGCGTATTTCCAAGGCCTATCTGATCGGCGAGGCAGCGCCCGCCTTTGCCGCGACGCTCGGCGATCAGGTGCCCTACGAGATTTCCGGCACGCTGGAGCGCGCCGTCGCACATGCTGCCGCGGATGCGGACAGGGACGAACACGAGTCCGCTGCGGTGATGCTGTCACCGGCTTGCGCAAGCTTCGATCAGTACAAGAATTTCGAGGTCAGGGGCGACGCCTTCGTCAGCCATGTCGCTGCGATCGATGGCGTCACCATGCTGATCGGTTCAGCAGCTGGAGGCAAATGA
PROTEIN sequence
Length: 471
MIPITTLNGKKVALFGLGGSGFATARALVAGGADVTAWDDNPDSVAKAAAEGIAVADLRTIDWNGLSVFVLSPGVPLTHPKPHWTVDLAHAAGVEIIGDVELFVRERRAFAPDCPFIAITGTNGKSTTTALIAHILQSSGRDTQLGGNIGTAVLTLDPPKAGRFYVVECSSYQIDLAPTLNPSAGILLNLTPDHLDRHGTMQHYADIKERLVAGSDVAVVGVDDSYSSLIADRIERAGIKVMRISRRHPLANGLYAEGSRIIQASNAAAAEIADLDGIQTLRGGHNAQNAAAAIAACLAVGVSAEEIRAGLKSFPGLKHRMQPVGKRGRVVFVNDSKATNADAAAPALSSYENIYWIAGGLPKEGGITSLAPLFPRISKAYLIGEAAPAFAATLGDQVPYEISGTLERAVAHAAADADRDEHESAAVMLSPACASFDQYKNFEVRGDAFVSHVAAIDGVTMLIGSAAGGK*