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SCNpilot_expt_500_bf_scaffold_1058_16

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(16330..16794)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 137.0
  • Bit_score: 259
  • Evalue 4.30e-66
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V1J4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 137.0
  • Bit_score: 259
  • Evalue 3.10e-66
UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D -alanyl-D-alanine synthetase protein similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 137.0
  • Bit_score: 252
  • Evalue 6.90e-65

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
TTGAGCTGGCTATGGACAACTGAGGATCTGATCGCTGCAATTTCGGGCCGCTTCGTCGGATCGCTGCCCGCTGGCATCACAGGCATTTCCATAGACAGTCGTTCCATCCAGCCGGGCGAGGCATTTTTCGCCATCAAGGGCGATCGCGTCGACGGTCACGACTATGCCAATATTGCGATGGCGAACGGCGCCGCCTTCATTGTGATCAGTGAGGCGCGGCTGCCTGCAATGGGCAGTTTGACCGTGCCGAAGGTCATCGTGGATGACGTCCTGGCGGCGCTGGCACGGCTTGGCGTAGCCGCCCGCAAGCGCACGCAGGCCAAGATCATCGCCGTCACGGGTTCGGTCGGCAAGACGACGACGAAGGAGATGCTGCGGCGCGCGCTGACGCCTTCTGGCAAGGTGCATTCACTCTCGCGCGCATGCCCGAAGACACCGATTTCGGCGTTTTCGAAATCGGCATGA
PROTEIN sequence
Length: 155
LSWLWTTEDLIAAISGRFVGSLPAGITGISIDSRSIQPGEAFFAIKGDRVDGHDYANIAMANGAAFIVISEARLPAMGSLTVPKVIVDDVLAALARLGVAARKRTQAKIIAVTGSVGKTTTKEMLRRALTPSGKVHSLSRACPKTPISAFSKSA*