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SCNpilot_expt_500_bf_scaffold_1058_18

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(17927..18238)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 91.0
  • Bit_score: 155
  • Evalue 5.90e-35
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJU8_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 91.0
  • Bit_score: 155
  • Evalue 4.20e-35
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 91.0
  • Bit_score: 155
  • Evalue 1.30e-35

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGAACTTGCGGGATATTGCCGGAAATGCGTTTCCGGAACTCAACACACAAATTGGCGGCGCGCTTGGCGATCTTGAAATAGGCGGGATCACTGCCGACAGCCGTAAGGTATTGCCGGGCATGGCCTTCGTCGCCGTCGCCGGCACGAAGGCCGATGGTGCAAGCTTCATCGCCGATGCCGTCGCGCGCGGGGCCTCCATCGTGGTCGCGGGCCATAAGGTCGATGCCGGCAATGTGCCCCTGTTGCGGGTTTCCGAGCGGCGCCGATTCCTCTTTTCTACGGACGGCAGCCGCAAACGATGGTTGCGGTGA
PROTEIN sequence
Length: 104
MNLRDIAGNAFPELNTQIGGALGDLEIGGITADSRKVLPGMAFVAVAGTKADGASFIADAVARGASIVVAGHKVDAGNVPLLRVSERRRFLFSTDGSRKRWLR*