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SCNpilot_expt_500_bf_scaffold_1058_22

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(20526..20867)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 113.0
  • Bit_score: 212
  • Evalue 3.40e-52
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLT9_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 113.0
  • Bit_score: 212
  • Evalue 2.40e-52
mraW; S-adenosyl-methyltransferase MraW similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 113.0
  • Bit_score: 212
  • Evalue 7.60e-53

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
CAGGCATTGTTTGCGGCAGAGCGCGCGCTCAAGCCGGGTGGGCGCCTTGTCGTCGTGACCTTCCATTCGCTGGAGGATCGCATCGTCAAAAAATTCTTTGCCGATCGCTCGGGTCGCGCCGCCGGGTCGCGTCACATGCCGATCGTGAATGAGCGGCCTGCCACCTTCGAGCCGGTTGGCAAGTCGATGATTTCTGCGAGTGACGCGGAGGCGGAAGCCAATCCGCGTGCTCGCTCAGCCAAATTGCGTGCGGGGGTTCGCACTTTGGCTCCGGCGGAGGCGGCAGATCTCTCGATCTTCGATCTGCCCAATCTCGCCAGTCTTGGAAAGCTTGGGGGCTGA
PROTEIN sequence
Length: 114
QALFAAERALKPGGRLVVVTFHSLEDRIVKKFFADRSGRAAGSRHMPIVNERPATFEPVGKSMISASDAEAEANPRARSAKLRAGVRTLAPAEAADLSIFDLPNLASLGKLGG*