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SCNpilot_expt_500_bf_scaffold_2960_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 2491..3360

Top 3 Functional Annotations

Value Algorithm Source
Putative beta lactamase transcriptional activator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V4Y5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 276.0
  • Bit_score: 532
  • Evalue 2.10e-148
  • rbh
Putative beta lactamase transcriptional activator {ECO:0000313|EMBL:ENN88196.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 276.0
  • Bit_score: 532
  • Evalue 2.90e-148
HTH-type transcriptional activator AmpR similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 275.0
  • Bit_score: 525
  • Evalue 1.40e-146
  • rbh

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
TTGGCCTTAGGACACAAATGGACATCTCACAGCTGCCGTTCGGCGCGCCATTGCAGCTTTACGCGGGCCGGACTGGAACTCCGGGTCACCCAGACGGCTATCAGCCATCAGGTCAAGGCGCTGGAGGACGTGCTTGGCGTGACCCTCTTCAAGCGCCTGCCGCGCGGCCTTGCCCTGACCGATGAGGGACACGCGCTGCTGCCGGTGCTGACCGATGCCTTTCGCCGCATGAGCGCCACGCTCAGCCAGCTGGAGGAGGGGAACTTTGCCGAAATCCTGACGGTTGGCGTCGTCGGCACCTTTGCCATCGGCTGGTTACTGCCGCGCCTCGGGGGCTTCAAGGCGCTGCATCCGCATGTCGATCTGCGCCTGAAAACAAACAACAATCGCGCCGATATGGTGCTCGACGGGTTGGATTTCTTTCTGCGCTTCGGCGACGGCGCCTGGCATGGGACCGAGGCGATCCACCTTTTGGATGCGCCGCTCTCTCCGGTCTGCACGCCGGCGCTTGGGGAAAGGTTGCGCAGGCCTGCCGATCTCGCCGATGTCGAGCTGTTGCGCTCTTATCGGCTCGACGAATGGTCGCTCTGGTTCAGGGCTGCGGGTCTGCAGCCTCCTCATCTGCGGGGCTGGATGTTCGATTCCTCACTGACACTCGTGGAAGCTGCGGCACGCGGCGTGGGCGTCGCGCTCGTGCCAGTGGCGATGTTCTCGCACGACATCGAGGCCGGGCGCATCATGCAACCGTTCACAATGACCGCGACGACCGGAAGCTACTGGCTGACGCGATTGAAATCGCGGGCAGAGACGGCGTCGATGAAAACGTTTCGGCAGTGGCTGCTTGCAGAAATCGAGGAGATGCCTGGGTGA
PROTEIN sequence
Length: 290
LALGHKWTSHSCRSARHCSFTRAGLELRVTQTAISHQVKALEDVLGVTLFKRLPRGLALTDEGHALLPVLTDAFRRMSATLSQLEEGNFAEILTVGVVGTFAIGWLLPRLGGFKALHPHVDLRLKTNNNRADMVLDGLDFFLRFGDGAWHGTEAIHLLDAPLSPVCTPALGERLRRPADLADVELLRSYRLDEWSLWFRAAGLQPPHLRGWMFDSSLTLVEAAARGVGVALVPVAMFSHDIEAGRIMQPFTMTATTGSYWLTRLKSRAETASMKTFRQWLLAEIEEMPG*