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SCNpilot_expt_500_bf_scaffold_4918_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(1327..2226)

Top 3 Functional Annotations

Value Algorithm Source
LysR-family transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V7C8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 296.0
  • Bit_score: 516
  • Evalue 2.10e-143
  • rbh
LysR-family transcriptional regulator {ECO:0000313|EMBL:ENN89740.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 296.0
  • Bit_score: 516
  • Evalue 2.90e-143
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 291.0
  • Bit_score: 250
  • Evalue 8.70e-64

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGCGATTGAAACCAAGGCAAGTGGAAGCGTTCAGAAGCGTAATGATGACGGGGGGCATCACGGCAGCGGCCGATGCCCTGAACGTCACGCAGCCCGCCGTTAGCCGCCTCATCCGCGACCTCGAGGAAATTCTGGATATTACCCTGTTCGAGCGAGTCGGCGCCCGCCTCGTGCCGACGGTCGAGGCGACACAGCTCTTCCGGGAAGTCGAGCGGCTGTATCTCGGCCTTGACCAGATCGCCCAGGCGGCCGACGACATCCGCCGGCACAAGAACATCGTCTTGCGCATTGCAAGCGTAACATCGCTCGTCAGACCATATCTCCATCAGGCGATCCTTGATGTCGTCGGCAATCGGCGTGATATTCCGCTGGTCATCGATGTCGAAAACAGCCGGCACATCTGGGATATGGTCGACAAGAACCGCTACGATCTCGGCTTCGTGTTCGGCTCGCCCCGCATGGCGGACAAGAATGCCGTTCTCCTGCATAGCTCCCATGCCGTCGCCGCCATGGCGCCGGAACACCGGCTTGCCGCGCGAAAGGTCATCCGACCCGCCGATCTCATGGATGAGCGCGTGCTGATCCCCGGCCGCAATTCGCCGCTCAGACTGGCGCTCGACCGCGCCTTTTCCGGGCAGGATCATCAGCCGATGAGCACGATGGAAACGTCGATGCTTAACTGCTGTCATTTCGCGGCGGCAGGCATGGGCGTCGGCATCGTTGACCACACAAGCCTGCAGTCCGCCGGAATCGATATCGTCGCGATCCCGTTCGAACCGCAGATCGAGGTCGCCTACTTCGCGATTCGTCCTTCCGGCGCTCACCGCATCTCTATCTTGGACGAACTGATCAAACGAATGAGCGAGCTCGTAGGCTCAGGTGCAACATCCCCGATCTAG
PROTEIN sequence
Length: 300
MRLKPRQVEAFRSVMMTGGITAAADALNVTQPAVSRLIRDLEEILDITLFERVGARLVPTVEATQLFREVERLYLGLDQIAQAADDIRRHKNIVLRIASVTSLVRPYLHQAILDVVGNRRDIPLVIDVENSRHIWDMVDKNRYDLGFVFGSPRMADKNAVLLHSSHAVAAMAPEHRLAARKVIRPADLMDERVLIPGRNSPLRLALDRAFSGQDHQPMSTMETSMLNCCHFAAAGMGVGIVDHTSLQSAGIDIVAIPFEPQIEVAYFAIRPSGAHRISILDELIKRMSELVGSGATSPI*