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SCNpilot_expt_500_bf_scaffold_5150_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 4275..4934

Top 3 Functional Annotations

Value Algorithm Source
Two-component response regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JLI1_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 219.0
  • Bit_score: 367
  • Evalue 1.10e-98
  • rbh
two-component response regulator protein similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 219.0
  • Bit_score: 367
  • Evalue 3.60e-99
  • rbh
Putative two-component response regulator {ECO:0000313|EMBL:GAJ95431.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 219.0
  • Bit_score: 367
  • Evalue 1.60e-98

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGAATCGCCCGCTGACTGTCATCATCGCCGACGACCATGCCATCGTCCGCGAGGGATTGAAGCTCCTGATCTCCGCCATGACGGACGTTTCCATCCTTGCGGAGGCGGCCAACGGCGAAGCGCTGCTCGATATCGTGCGCGACACGCGCGCAGACCTCCTGACCCTCGATCTCGGCATGCCCGGTGTCGCCGGAATCCAGTTCATCGCCGAAATCCGGACGCTGGCGCCCCGCATGCGCATCCTGGTGCTGACGGCGAATGTCGAACCGCGCACGGTACGAGCCGCGCTGGAGGCCGGCGCTAACGGCTACCTCACCAAGGACGGCGATCCCGAGGAACTCGACCAGGCGATCGCGGCCTTGAAAAGCGGCAGGACCTATCTGGCGAAATCGATCCGGTTCGCGGTTGAGCGGCCGGAGCGGCCGGGCAAGGTGCCAGTCACGGGAGAAATCGTTTCGCCCATTCCCCTGACGCTGCGGGAGCGCCAGATCCTGCTTCTGTCGGCGCAGGGCCTGACGGCGAAGCTCATGGCGGAGCGGCTCGGCATCAGTCCGCTGACGGCCCGCAAGCATCGGGAAAACCTGATGCGCAAGCTTAGTCTTCACAGCACTGCCGAAGTGACGGCCTATGCGGTCCGGCTTGGATTGCCGGTTGGCTGA
PROTEIN sequence
Length: 220
MNRPLTVIIADDHAIVREGLKLLISAMTDVSILAEAANGEALLDIVRDTRADLLTLDLGMPGVAGIQFIAEIRTLAPRMRILVLTANVEPRTVRAALEAGANGYLTKDGDPEELDQAIAALKSGRTYLAKSIRFAVERPERPGKVPVTGEIVSPIPLTLRERQILLLSAQGLTAKLMAERLGISPLTARKHRENLMRKLSLHSTAEVTAYAVRLGLPVG*