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SCNpilot_expt_500_bf_scaffold_5197_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(5802..6311)

Top 3 Functional Annotations

Value Algorithm Source
Chemotaxis signal transduction protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CL52_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 156.0
  • Bit_score: 239
  • Evalue 2.10e-60
Chemotaxis protein CheW {ECO:0000313|EMBL:KGD97035.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 158.0
  • Bit_score: 242
  • Evalue 6.00e-61
CheW protein; K03408 purine-binding chemotaxis protein CheW similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 150.0
  • Bit_score: 232
  • Evalue 8.10e-59

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGCTGCAACCAGCACCGAAGCTCAATATGTGACGTTCGGCCTCGGCGATGAAAGCTTCGCCGTGCCTGTCGAGGTGGTCCGGGAAATCCTGGACCATCAGGACGCCTTCCGCATTCCGCATGGACCTGACTATCTGCTCGGCCTCCGGGACGTGCGCGGTCAGGGCGTGCCGGTTATCGACCTGCGCCTGCGTCTGGGCATGTCGGCCACCACGAAGACGCCGCACACGCGCATCCTCGTGATCGACATCCCGATCACGGACAAGGCCCTAACGCTCGGCCTGGTCGCCGATCGCGTCTTCGAGGTGACGTCCTTCAAGCATCAGTCGATCGAAAGCGCCCCCGATATCGGGGTGCGCTGGCCGTCCGAATACATTGCCGGCGTCGTGCGCCGCGACGGTGGGTTCGTTGTCATCATCGATCTCGCGAAGCTTTTCTCATCGACCGACAAGGTGTCGCTGATGGGAGTAGGCACCGGCCATAGGGCCCACGAGTTCGCCGCTGTTTGA
PROTEIN sequence
Length: 170
MAATSTEAQYVTFGLGDESFAVPVEVVREILDHQDAFRIPHGPDYLLGLRDVRGQGVPVIDLRLRLGMSATTKTPHTRILVIDIPITDKALTLGLVADRVFEVTSFKHQSIESAPDIGVRWPSEYIAGVVRRDGGFVVIIDLAKLFSSTDKVSLMGVGTGHRAHEFAAV*