ggKbase home page

SCNpilot_expt_500_bf_scaffold_5212_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 4696..5271

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00035F96EB similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 174.0
  • Bit_score: 227
  • Evalue 9.40e-57
LuxR family transcriptional regulator {ECO:0000313|EMBL:KKB76843.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 174.0
  • Bit_score: 236
  • Evalue 3.70e-59
LuxR family transcriptional regulator/sensory box protein similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 176.0
  • Bit_score: 198
  • Evalue 1.50e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGCCTTCCATTGAAATCCGCCCGTTTCGGGACAAGGAAGTCCAATCTCTCCGCTTCTTGCTGAGCGATATTCCTGTACCCATGGTCTGTGCCGCCTACCGCATCATTCGCGACTGCAATGCTGCCTTTGCAGGGCTTTTCGGCTATGAGCGCGAGGATCTGATTGATCAGAGTTTCGCACGCCTTTACCCGGAAATCTCCGATTTCGCCCGGACCGGTCGGATGTGGCAGGAACATCTTCATGGCGGACAGTCATATTATGATGAGCGCGTTATGACCGATCAGGCAGGCGCGCGGTTCTGGTGTCAGGTTAGTGGACGGACGCTTCAACCGAACGATCCGTTTGCTCTTGCCTTATATTGCTTCCAGAAGATGAACCGGTCGCTTGATGCCGGTCAATTGCCGCTGACGGCACGTCAGCGGCAAATCATGGCGCTCGTTGCTCAGGGTAAAACCAACGCGGAGATCGGGCTGGAGCTACGGCTCTCCAAGCGGACGATTGAATCCCACCGTGCCCGATTGATGTCGCGGGTGGGAGCCTCCAATAGCGCAGAGCTCGTTTCCTGGTTTAGCTAG
PROTEIN sequence
Length: 192
MPSIEIRPFRDKEVQSLRFLLSDIPVPMVCAAYRIIRDCNAAFAGLFGYEREDLIDQSFARLYPEISDFARTGRMWQEHLHGGQSYYDERVMTDQAGARFWCQVSGRTLQPNDPFALALYCFQKMNRSLDAGQLPLTARQRQIMALVAQGKTNAEIGLELRLSKRTIESHRARLMSRVGASNSAELVSWFS*