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SCNpilot_expt_500_bf_scaffold_5988_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(1..300)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator ptxR, putative (EC:4.2.1.1) similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 100.0
  • Bit_score: 184
  • Evalue 1.90e-44
HTH-type transcriptional regulator ptxR, putative {ECO:0000313|EMBL:EEF22306.1}; EC=4.2.1.1 {ECO:0000313|EMBL:EEF22306.1};; Flags: Fragment;; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 100.0
  • Bit_score: 184
  • Evalue 8.70e-44
HTH-type transcriptional regulator ptxR, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TPA8_RICCO similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 100.0
  • Bit_score: 184
  • Evalue 6.20e-44

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Taxonomy

Ricinus communis → Ricinus → Malpighiales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 300
ATGGATGATTTGCCGCTTGCCGATCTGGTTGCCTTCACCGCCGTTGCCCGCGAGCGCAGTTTTCGCGAAGCGGCCCGCAAGCGGGGTGTTTCAGCCTCGTCGCTGAGCGAAGCGGTCCGACGGTTGGAGGAGCGGCTGGCGGTGCGCCTTCTCAATCGCACAACCCGGAGCGTGACGCCGACGGAGGCTGGGGAGCGGTTGATGGAGCGCCTGACGCCCGCCATGAGCGAGATCGCCGGGGCACTCGACGACATCAACAGCTTTCGCGACAGCATCGGTGGGACCCTGCGGCTGAATGTG
PROTEIN sequence
Length: 100
MDDLPLADLVAFTAVARERSFREAARKRGVSASSLSEAVRRLEERLAVRLLNRTTRSVTPTEAGERLMERLTPAMSEIAGALDDINSFRDSIGGTLRLNV