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SCNpilot_expt_500_bf_scaffold_5525_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(294..1181)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=gamma proteobacterium WG36 RepID=UPI000369A90A similarity UNIREF
DB: UNIREF100
  • Identity: 36.7
  • Coverage: 289.0
  • Bit_score: 195
  • Evalue 1.00e-46
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK95714.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 288.0
  • Bit_score: 190
  • Evalue 2.70e-45
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 253.0
  • Bit_score: 136
  • Evalue 1.80e-29

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Taxonomy

Pseudomonas sp. M47T1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGAACCTAAGACAGCTTGCCTATTTCCGTGCGGTTGTAGAGCACCGCTCCCTAGCCGCCGCGGCGGAAGTTCTTCGGATTGCCCAGCCCAATTTGAGCGTTGCAATCAAGCAGCTGGAAGAAGAATGGGGGGTGTCGCTGTTCGAGCGAGCCGGCCGGGGGCTTACCGTGACCGAGACGGGCAGGATGTTGTACGAACGTGCAGCCGAGCTGCTGAGTGGCGCTTCTGCGCTTGAGCAAGACATGCGGGCGATCGGGCGCGGCTTTACCGCGCGGCTAAGGGTTGGATTTACGCAGGTCTCGCTGGAGATCATCACAACCATGGTCGCCCAGATCCGCGAGGAAGGTGCCGCGGTCAGTTTCTCGCTGCAGCAGGGGGAGCCTCAGCTTCTCGAAACGATGGTCGAAATGCGCCAGCTGGATTTCGCGGTTACCCATATGCCCGTCGCGAATTTCGGATTGGGAGTTGAAGCATTGGCGCCACTGACGGTCGTCCTTCTGTGCCGGGAGAGCGACAACAGATGGGAACGAGGTGCCGAAATTCGACCGGAGGCTCTCACGAACGTTCCGCTTATCTTGCTCCGTCGCCGATCCGGTATTGGCATCTATGAGCGGATCATGGATGCCTTTGCTAGTGCTGGTGTTTCCTGTTCCGTCGTGGCCGACAGCACGGACATTTCGGCAATCTATACGCTGGTCGAGAGAAATATGGGCCTTGGCCTCCTGCCGATCCATACCCTGCATGTGCCTCGGCCCGGATTTTCGATGCACCCCGTGGCGCTGCTGCCCACGCCTGAGCGTCTTGCTCTGGTCTATCCCCGTGGATATCGGCAACTACCTACGGTTCAACGGGCGATGGAGCTATGTCGGATGCTTCTGCGAGGATGA
PROTEIN sequence
Length: 296
MNLRQLAYFRAVVEHRSLAAAAEVLRIAQPNLSVAIKQLEEEWGVSLFERAGRGLTVTETGRMLYERAAELLSGASALEQDMRAIGRGFTARLRVGFTQVSLEIITTMVAQIREEGAAVSFSLQQGEPQLLETMVEMRQLDFAVTHMPVANFGLGVEALAPLTVVLLCRESDNRWERGAEIRPEALTNVPLILLRRRSGIGIYERIMDAFASAGVSCSVVADSTDISAIYTLVERNMGLGLLPIHTLHVPRPGFSMHPVALLPTPERLALVYPRGYRQLPTVQRAMELCRMLLRG*