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SCNpilot_expt_500_bf_scaffold_7426_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(6036..7181)

Top 3 Functional Annotations

Value Algorithm Source
GGDEF family protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UD69_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 371.0
  • Bit_score: 569
  • Evalue 2.00e-159
  • rbh
GGDEF family protein {ECO:0000313|EMBL:ENN88113.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 371.0
  • Bit_score: 569
  • Evalue 2.80e-159
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 183.0
  • Bit_score: 256
  • Evalue 1.20e-65

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
TTGTTGTCGCGGCTTAGAATTCAACAGCTGCAATGGATCGGCGCCGTAGCTGTTATCATGGTATGCTTGATGATGGCAGGCTCGACGATTGCCTTCAGCCTGTCGGATTACATCAATTACAAGCGCGGCGTCACAGAGTTCAGCCGCTTTCACACCGCGTTGCATGCGGCCGCGACCATATCGAGAGAACGCGGGCCGGCAAATAGTCTCATGGGCGCCACGCAAGAAGAGCAGCCTCAATTTACTGCCGCCTTGAAGGCAAGCCGCGCGGAGACTGACAAGGATATCACCGAGCTCGAGGCGCTGTTCAAGACGGAGATAGATCAATCGGCGGAGATGCGCAGCGCGTTCGCTGCCGTCAAGGCCCAGTTGGAAAGCGGCCGGCGAGCAGTGGACGCCGTGGCTGCCATGCCGCTCAGCGAGCGCAGCGGTGCCAAGATTGCCGACGCCATACAGGCTATGTTCCGCGCCGCCGACCGCGCTCAGGATTACCGGGATGTCGCCGGCCGCTCGATTATTGCACTCGCCCCTGAGACGGGCGCCGAGGTGATGCTGTCCTCGATGGCTGGAACACTCAGGGAACGTGCGGGAAGAGTGGGCTCGTATGTGGTCATGATGCTGACATCGCAAGGGCAGGCCCGTTCCCACTACCGGGTCGCGTTTGAAAGCGAGTTGAATCGACTTTTCGAAGTGAATGTGCTGCTGAAGACCTACGCTCCCGCCGCGTTGCAATCCCAGGACGTAGCGCAGCTGTTGGACCAGGTGACGATAAGCTACTTTTCCGGATCTTTGCCTTACGCTCAACGCGTCGCCTTCGAGCTCAACACGGGCCATGCACCGACGCCAGGCGAATTCACAGCCAAATATGTGCCTGGAATGAAGTCGACTGAAAACTTGCGCGAACTGATCGAAGCCGTAGCACTGGTATCGCTCGAGAAAGTACAGCAGAAAGCCCTGAAAGCGATGCTGGTCTCCGCACTGCTCGCCGGCATGGCCATATTGGTCATGATCGGACTGGCCTACGTGCTCAGGCGATCGCTTTTCCGGCCCATGTTCGCGGTCATGCGGCAGATCGATGAGATCGCCGTCGGCAATCTCACGACACCACCTTCAGACGGCACCTGGAAATGGAGCGCAAGTCGATGA
PROTEIN sequence
Length: 382
LLSRLRIQQLQWIGAVAVIMVCLMMAGSTIAFSLSDYINYKRGVTEFSRFHTALHAAATISRERGPANSLMGATQEEQPQFTAALKASRAETDKDITELEALFKTEIDQSAEMRSAFAAVKAQLESGRRAVDAVAAMPLSERSGAKIADAIQAMFRAADRAQDYRDVAGRSIIALAPETGAEVMLSSMAGTLRERAGRVGSYVVMMLTSQGQARSHYRVAFESELNRLFEVNVLLKTYAPAALQSQDVAQLLDQVTISYFSGSLPYAQRVAFELNTGHAPTPGEFTAKYVPGMKSTENLRELIEAVALVSLEKVQQKALKAMLVSALLAGMAILVMIGLAYVLRRSLFRPMFAVMRQIDEIAVGNLTTPPSDGTWKWSASR*