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SCNpilot_expt_500_bf_scaffold_7454_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(3135..4085)

Top 3 Functional Annotations

Value Algorithm Source
Dipeptide ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JKE3_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 307.0
  • Bit_score: 504
  • Evalue 8.60e-140
  • rbh
ABC transporter permease {ECO:0000313|EMBL:KEA08885.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 314.0
  • Bit_score: 512
  • Evalue 3.40e-142
dipeptide ABC transporter; K02033 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 307.0
  • Bit_score: 504
  • Evalue 2.70e-140
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGCCTGGCTCGAGCGCTAAGTTTCTCCAGTCCGTGATGCGGCGGACCGGTGTGATCGTTGCCGTGCTCTGGGGCGCGGCAACGATTGCCTTCATCGCGGTGAAGCTCATTCCCGGCGATCCCGTTGCCATCTTGGCTGGCGGGGAAAACGTCGTCGATGAAGCCGAACGCGCCGCATTGGTGCATCAATATGGTCTCGACCAGCCGCTTGTGCTGCAATATCTGCATTACATCGGCAGGGCTCTGAGCGGCGATTTCGGGGAAAGCTATCAGTACAGGCAGCCGGTATCCGAGGTGATCTACGAGGCTGCAGGGCCGACATTGCAGCTTGCCGGGAGTGCAATCGCGCTTGCTCTTCTTCTGGCGATCAGCGTCGCACTGGCGACGGCGGGCCGTCGCAGAAGCCTGACGCTGCTGTCCTCTGGCATAGAACTTATCCTTCTGAGCACACCCGTCTATTGGATCGGCATCCTCCTGCTGACGATCTTCAGCTTCAATCTGCAATGGTTTCCGGTGACCGGCAATGACGGCCCGGCCGCGCTGGTGCTCCCCGCCATTGCTCTCAGTCTGCCTCTGGCAGCACTTCTAAGCCAGGTGCTCAGGGACGGCCTGGAGGAAGCGTTGTCCCAGCCGTTTTCGCTGACGGTTCGCACGCGGGGCGTCGGCGAGACCATGCTGCGCGTCCGGCACGGCTTGCGACACGCCGCGCTGGCGGCCTCGACCCTCACCGGCACACTTCTTGCCAGTACGCTCGGCGGCTCGATCCTGACCGAGACGGTGTTCGGCCGCTCGGGAATTGGGCAGATCACGCTTCAGGCGATCAAGACCCGCGACATGCCGCTGATCCTCGGTCTCGTCATGCTGTCCGCCCTTGTCTTCGTCATTGTCAATCTGCTGGTCGATGCCTTCTACCTTTTGATCGACCCACGTTTACGGAGGACAAGCCTTTGA
PROTEIN sequence
Length: 317
MPGSSAKFLQSVMRRTGVIVAVLWGAATIAFIAVKLIPGDPVAILAGGENVVDEAERAALVHQYGLDQPLVLQYLHYIGRALSGDFGESYQYRQPVSEVIYEAAGPTLQLAGSAIALALLLAISVALATAGRRRSLTLLSSGIELILLSTPVYWIGILLLTIFSFNLQWFPVTGNDGPAALVLPAIALSLPLAALLSQVLRDGLEEALSQPFSLTVRTRGVGETMLRVRHGLRHAALAASTLTGTLLASTLGGSILTETVFGRSGIGQITLQAIKTRDMPLILGLVMLSALVFVIVNLLVDAFYLLIDPRLRRTSL*