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SCNpilot_expt_500_bf_scaffold_7688_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(31..1152)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Rhizobium sp. AP16 RepID=J2WYV7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 335.0
  • Bit_score: 571
  • Evalue 8.80e-160
  • rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEA07737.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 372.0
  • Bit_score: 616
  • Evalue 2.00e-173
solute-binding periplasmic protein of iron/siderophore ABC transporter similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 379.0
  • Bit_score: 351
  • Evalue 2.60e-94
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGATAACGAGACGCCGGCTCTTTACCTCCGTCGCTGCCACGGCACTTCTTTCATGGGTGACGCCAACACTGGCGGATAGATCGTTCAAGGTGATCGATCTGGCGGGGCGCGAGCTCAAGTTCGCTGCTCCGCCGAAAAGGATCATTCTACTCGAGGCGCGTGATCTTTTGACGATGTCCCTCCTGCATCCCGATCCGGCGTCGCTGGTCGTCGGTTGGGCTGCTGTCGACAGGATCGACAGCGAACAGCTTCAGACACGTCTTCTGAACGGCCATTCTGTCAGCGTCGTTGGCAAGCAGACCCCCGATACCGTGTCCCTCGAAGGACTGATCAGTCTTTCGCCCGATCTCGTGGTGACGACTGCCTTCATGACGCCGGATGGCGACAGCAATCCGATGGTCGAGCGGTTGATGCAACTGGGGATCCAGGTCGCCTACAGCGACGCCGCGAGCAATAGCGCCAACAGTGGGGCGGCGAGCGATCCCGCGGCGGAGCTCGAGGCATCCATGCGCATGTGGGGGGCGCTTCTCAACACTACAGCGAAGGCGGAGAGATTCATCGCCTTCTTCGACGGTGAATTGACAAGGATTGTGTCCCTCGTCAAAGACAAGCCGCCGGTCACGACCTATCTGGAAGTCCAGTCCACCGTGGACGACTGCTGCTGGGCTGCTGGACGAAAGGTCTGGGGAGATCTCCTGGCGCTTGCGGGCGGTCAACCTTTGCCTGGCGTGACGGCGCCATGGTTTCAGCAATTGTCTCTGGAATATGTGCTTGCGACGCCGCACGATGTCTATATCGCTTCGGGCGGCGGCTGGGCTTCGGGCAGCCGTCCCGCAATCGGGCCGGGCCTCGATCCGAAGCTCGGTCGCGAGGGCCTGCAGCGACTGGTCGAGGGCCGCACCGGCTTCAGCCAGCTTCCAAGCGTTCGCCACAGGCGCGTATACGGCATATGGACCGGGTTGATTTCTAATCTGCCGTTGAATGTCCTGTTCGTGGCGCTCGCTGCCAAATGGCTCCATCCAGCTGAAACCGCCAGCCTCGATCCGGAAGCCATCCTGGATGCCATTAACAAGGACTTCGCCGCATTCCCGATCGAGGCGCCGTTATGGGCCTCGATCTAA
PROTEIN sequence
Length: 374
MITRRRLFTSVAATALLSWVTPTLADRSFKVIDLAGRELKFAAPPKRIILLEARDLLTMSLLHPDPASLVVGWAAVDRIDSEQLQTRLLNGHSVSVVGKQTPDTVSLEGLISLSPDLVVTTAFMTPDGDSNPMVERLMQLGIQVAYSDAASNSANSGAASDPAAELEASMRMWGALLNTTAKAERFIAFFDGELTRIVSLVKDKPPVTTYLEVQSTVDDCCWAAGRKVWGDLLALAGGQPLPGVTAPWFQQLSLEYVLATPHDVYIASGGGWASGSRPAIGPGLDPKLGREGLQRLVEGRTGFSQLPSVRHRRVYGIWTGLISNLPLNVLFVALAAKWLHPAETASLDPEAILDAINKDFAAFPIEAPLWASI*