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SCNpilot_expt_500_bf_scaffold_7688_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 3459..3740

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2X148_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 89.0
  • Bit_score: 136
  • Evalue 1.40e-29
Transcriptional regulator {ECO:0000313|EMBL:EJK88310.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 89.0
  • Bit_score: 136
  • Evalue 2.00e-29
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 75.0
  • Bit_score: 91
  • Evalue 1.60e-16

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGGAGAAAATAATGGCGGCGGAGAGCAAGAATATGGTCGGAAGGATCGGCCGTCCTTCGAAGGCAGATCAGGATATGGCAGCGGAAAGAATTATCGTGGCCGCCACGGAACTCTTTGCGAGCAAAGGATTTGCCGGCACCTCGATGGAACAGGTCGCCTCGCGCTGTGGAGCAGGCAAGGACACTGTTTATCGACGCTTCCCTTCCAAGGTCGCATTGTTTGAAGCGGTCGTGAGCCGTGCCCACAAGCAGGCAATTGCCAAGCTCGGCTGGAACGGTTAA
PROTEIN sequence
Length: 94
MEKIMAAESKNMVGRIGRPSKADQDMAAERIIVAATELFASKGFAGTSMEQVASRCGAGKDTVYRRFPSKVALFEAVVSRAHKQAIAKLGWNG*