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SCNpilot_expt_500_bf_scaffold_7688_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 3785..4096

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2X148_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 102.0
  • Bit_score: 160
  • Evalue 1.30e-36
TetR family transcriptional regulator {ECO:0000313|EMBL:KEA07739.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 102.0
  • Bit_score: 161
  • Evalue 6.30e-37
putative transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 103.0
  • Bit_score: 69
  • Evalue 9.50e-10

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
TTGATCGCACTGAAGCGCATCACCTTCAGTGAGACCGTCGTGTTTGAGAAGAAGGGGCCGATACCGCCGCAGCCTGATCCGATCATGGCAAAGCTGACCGAGGCGGAAGTTGAAGCGCAAGAGGCTGGCGCGATCAGTGCCGGAGACGCTACCGCGATTGCGCATCATCTCATTCACTGTATGGTCGCGTTGCCGACGACCGCGGCGATGATGGGCAGTAATGAATTTGACTCGCGCCAGACCATCGAAGCGCATTTTGACAGGACCTGGCATTGGCTTATCAACGGCCTGAGTGGAGGCAAGACGCGATAG
PROTEIN sequence
Length: 104
LIALKRITFSETVVFEKKGPIPPQPDPIMAKLTEAEVEAQEAGAISAGDATAIAHHLIHCMVALPTTAAMMGSNEFDSRQTIEAHFDRTWHWLINGLSGGKTR*