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SCNpilot_expt_500_bf_scaffold_6919_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(2..466)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 155.0
  • Bit_score: 304
  • Evalue 8.90e-80
RNA-splicing ligase RtcB n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VZ81_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 155.0
  • Bit_score: 304
  • Evalue 6.40e-80
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 155.0
  • Bit_score: 301
  • Evalue 1.30e-79

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGAGCGGACAGGATTTGATCGACGCCGGCATGAGCCAGGGAAAGTGGTTTCGCCCGGCTCTTGATGCGGCCAATGCGATTCTGAGCAAGGGTGGCTCGATGGCGGATGCGCTGGAAGCGGCAAAGGCCTTCCAGCCCGGACCAACGCTCGCCTTGAGGGCCGACAACGACATCGAGATCTATTCGAATATCCGCGCCGAAAACGCCTTCGAGCAGGACAATGTCGAGAAGGTCAACGCGACGATGCGGGCGCTGGTGCGCACGCCGGTCGTCCGTTCCGCGGCGATCATGCCGGACGCCTGCCCGGCAGGCCCGATCGGCACGATCCCGGTTGGCGGCGTGGTCGCTTCCGAAGCGATCCATCCCGGCATGCATTCGGCCGATATCTGCTGCTCGATGGCAATCTCGATCTTTCCGGGCGTCGATCCGAAAGCGCTGCTGGATGCCGTACACTCCGTGACGCAT
PROTEIN sequence
Length: 155
MSGQDLIDAGMSQGKWFRPALDAANAILSKGGSMADALEAAKAFQPGPTLALRADNDIEIYSNIRAENAFEQDNVEKVNATMRALVRTPVVRSAAIMPDACPAGPIGTIPVGGVVASEAIHPGMHSADICCSMAISIFPGVDPKALLDAVHSVTH