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SCNpilot_expt_500_bf_scaffold_7240_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(5407..6105)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator TetR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8Q1_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 237.0
  • Bit_score: 165
  • Evalue 6.90e-38
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CEJ11992.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 220.0
  • Bit_score: 195
  • Evalue 6.70e-47
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 237.0
  • Bit_score: 165
  • Evalue 2.20e-38

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 699
ATGGCGAGAGGCAATAGACGAACGGTCCGATCTCGGGATCGGCAGGATGGCGCGACGACGCGGACGAGCCTGCTCGAGGCAGGCGGCGCTGTTTTCGCGGAATTCGGCTTCGACCGCGCCACCGCAAAGGAAATTGCCCTGCGCGCGCAAACCAATGCCGCGGCGGTCAACTATCACTTCGGCGGCATCGAAGCTTTGTATGAAGACGTCCTTGCCGAGGCGCATCGTCGCCTGATGAGCTATGAAGTGCTCGCCGGCACCGCCACGGCGGATATCGATCCGAAGGAGAAGCTGCGCCGGTTCATCGGTCTGCTGGTCAAGGTGGTGCGGACCGGGAATGAGAATTCATGGCCGGCCAAGGTCATCGTCCGTGAATTGATTGCGCCGACGCCGCACATCGGCAAGCTCCGACGCGAAGAGATCGAGCCGAAGAAAGCTCTGCTGTTTGGAATCCTTGCCCAGATTATCGGTGTCGAGCCGGACCATCCGCTCGTTGCTCAGGGGGCATTTTCGACGATTGCGCCGTGCTTCATGCTTCTGGTCGCCGACAAACGCGTGTCCGAAATCATTCCGGCGCTCGGCCGGGAAACAACGACGGATGAAGAACTGACGGATCGATTGTTTCGCTTTACGCTCGGCGGTCTCGCGCAGCTTGCGCTGTCGGTACTGCCGCCAAGATCAGCCGATCAGCCCAACTGA
PROTEIN sequence
Length: 233
MARGNRRTVRSRDRQDGATTRTSLLEAGGAVFAEFGFDRATAKEIALRAQTNAAAVNYHFGGIEALYEDVLAEAHRRLMSYEVLAGTATADIDPKEKLRRFIGLLVKVVRTGNENSWPAKVIVRELIAPTPHIGKLRREEIEPKKALLFGILAQIIGVEPDHPLVAQGAFSTIAPCFMLLVADKRVSEIIPALGRETTTDEELTDRLFRFTLGGLAQLALSVLPPRSADQPN*