ggKbase home page

SCNpilot_expt_500_bf_scaffold_8492_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(948..1292)

Top 3 Functional Annotations

Value Algorithm Source
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 112.0
  • Bit_score: 218
  • Evalue 6.20e-54
dapE2; succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 112.0
  • Bit_score: 216
  • Evalue 4.10e-54
Succinyl-diaminopimelate desuccinylase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V038_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 112.0
  • Bit_score: 218
  • Evalue 4.50e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGACTGTTACCGATCCCGTCGCCAATCTGCAGACCCTCATTCGCTGTGCCTCCGTCACCCCTGCCGAAGGCGGTGCGTTGACCGCACTTGCCGACATGCTGCTGCCGCTCGGCTTCAAGGTCGAACGCATGACCGCAAGCGAGCCGGGAACGCCCGATATCGAAAACCTTTATGCGCGCCTCGGCGCGGATGGGCCGCACCTGATGTTTGCCGGCCATACGGATGTCGTTCCGATCGGCGATGCGGCTTCCTGGACCCATCCGCCTTTCGCCGCCGAAATCGCCAATGGCGAGCTTTTCGGCCGCGGCGCAGTGGACATGAAGGGCGGCATCGCCGTCAGATAG
PROTEIN sequence
Length: 115
MTVTDPVANLQTLIRCASVTPAEGGALTALADMLLPLGFKVERMTASEPGTPDIENLYARLGADGPHLMFAGHTDVVPIGDAASWTHPPFAAEIANGELFGRGAVDMKGGIAVR*