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SCNpilot_expt_500_bf_scaffold_8909_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(776..1972)

Top 3 Functional Annotations

Value Algorithm Source
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=1 Tax=Rhizobium sp. CF142 RepID=J2B532_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 398.0
  • Bit_score: 608
  • Evalue 5.30e-171
  • rbh
Mandelate racemase {ECO:0000313|EMBL:KGM35590.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 398.0
  • Bit_score: 624
  • Evalue 1.30e-175
mandelate racemase/muconate lactonizing protein similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 398.0
  • Bit_score: 559
  • Evalue 6.80e-157
  • rbh

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
GTGAAGATCGTCGACGTCAAATGCGCCGTCATCGGCTCAAGCCCTGTTATCCGCATAGTCACCGATGCCGGCATCGACGGCTATGCACAGGCGGAAACCTGGAAGCCGTTTCTGAAGCCCTATATTCTCGCGTTTCGGGAGGCGCTCATCGGCCTCGATCCGACCGACGTCGAGCGCGTGATGCTGCGCATCCGGCAGCGTGGCGGTTTCAAGCCCTGGGGGGCAGTCGTCAGCATCATCGAGATAGCCCTATGGGACATTGCCGGCAAGGCGGCGGGTGTTCCGGTCTACAAACTTCTGGGCGGGAAGGTGCGCGATCGGGTCCGTGTCTATAATGGTGCGGTCCGCAAACCGATGAGCGGCTTTTCGCCGGCGGACTATGCCAAGAGTTGCCGTGAAATGAAGGCGGCGGGCGAGGGTTTCACCATCGTCAAGCAGCCGATCGGCTTTCACAGCCGCATGCGCGTCGAGGTGCCGGATTTCTTCTATGGCGATCCGGAAGCAGGCGGAATGCACGGCGCGCACGATCGCGGGCTGCTGACCGAGCGTGGGCTCAAACACATGGTCGCCTGTGTGGCCGCGATGAAGGAGGAGCTGGGTGACGAAATCGGCCTGGCGCTCGATTGCGGCCCCGGTTGGACCGTGCCGGATGCGATCCGCTTTGCCAGGGCGGTCGAACCGTTCAATCTGGTCTGGCTGGAAGATATGCTGACCGGCGATTATTCACCTTTTGTCAACGCGGATGTCTATCGCGATCTGACCCTGTCGACATCGACGCCGATCCATACGGGGGAGCAGATCTATCTCAGGCAGAACTTCAAGCCGCTGATCGAAAACAAGGCCGTCAACGTCATCGGGCCGGACCCCAGTGACGTTGGCGGTATTGCCGAACTCAAATGGATCGCCGAATATGCCGACCTGCACGGTATCCTGATGGCCCCGCACGGAACGGCCAATGGTCTTTTGGGACTGGCCGCGCTCGTCCAGGTCTGTGCAACGCTTCCGCACAATTATGTGGCATTCGAATACACGATCGGTGATCCGTCCTGGTGGTACGATATTGTCGATGGTCTGCCAGATCCGCTTGTCACCGACGGCCATATCGGCGTCTGGGATGCTCCCGGACTCGGAGTGACGTTGAATACGGACAGAGCGAGGGCCTATCTGACAAAGGAGGACCATGCGTTCTTTGATTGA
PROTEIN sequence
Length: 399
VKIVDVKCAVIGSSPVIRIVTDAGIDGYAQAETWKPFLKPYILAFREALIGLDPTDVERVMLRIRQRGGFKPWGAVVSIIEIALWDIAGKAAGVPVYKLLGGKVRDRVRVYNGAVRKPMSGFSPADYAKSCREMKAAGEGFTIVKQPIGFHSRMRVEVPDFFYGDPEAGGMHGAHDRGLLTERGLKHMVACVAAMKEELGDEIGLALDCGPGWTVPDAIRFARAVEPFNLVWLEDMLTGDYSPFVNADVYRDLTLSTSTPIHTGEQIYLRQNFKPLIENKAVNVIGPDPSDVGGIAELKWIAEYADLHGILMAPHGTANGLLGLAALVQVCATLPHNYVAFEYTIGDPSWWYDIVDGLPDPLVTDGHIGVWDAPGLGVTLNTDRARAYLTKEDHAFFD*