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SCNpilot_expt_500_bf_scaffold_11142_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 2..214

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF2812 related cluster n=1 Tax=unknown RepID=UPI0003CF2812 similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 69.0
  • Bit_score: 134
  • Evalue 5.20e-29
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AJW29567.1}; TaxID=1628059 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. JE1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 70.0
  • Bit_score: 138
  • Evalue 5.10e-30
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 68.0
  • Bit_score: 109
  • Evalue 5.70e-22

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Taxonomy

Sphingomonas sp. JE1 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
CGCCACTTCAAGGCTGTGACCGCACTCAGCCCGCTACAGTATCAGAAGCACGTGAGATTGCTGCACGCTCGATCTCTTCTCATCGCGGGCGAAGGCAATGCCACGTCCGTAGCATTTGGTGTCGGCTATGAGAGCCCAACCCAGTTCAGCCGCGAGTATGCCAGGCAGTTCGGTCTGCCGCCGTCGAAAGATGCAGCAAAACTGCGGGCATAG
PROTEIN sequence
Length: 71
RHFKAVTALSPLQYQKHVRLLHARSLLIAGEGNATSVAFGVGYESPTQFSREYARQFGLPPSKDAAKLRA*