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SCNpilot_expt_500_bf_scaffold_10180_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 2877..3683

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter substrate-binding protein n=1 Tax=Rhizobium radiobacter RepID=UPI00037D7532 similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 268.0
  • Bit_score: 485
  • Evalue 2.70e-134
  • rbh
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJF71985.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 268.0
  • Bit_score: 487
  • Evalue 9.90e-135
Periplasmic component of amino acid ABC-type transporter/signal transduction system similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 268.0
  • Bit_score: 482
  • Evalue 1.20e-133
  • rbh

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Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGAAAAAAATAGTCATCGCATTCGGCCTTCTGGCCGCTGTTACAGCTATCACGCCGGCTAAAGCCGATAAGCTTGATGATATCATCTCCTCGGGAACGCTCCGTTGCGCCGTCGTGCTCGATTTCCCGCCCATGGGCTCGCGCGACGCGAACAACAATCCGATTGGCTTCGACGTCGACTATTGCAACGATCTGGCCAAGGCGCTCGGCGTCACGGCCGAGATCGTCGAAACGCCGTTCCCCGAGCGCATTCCGGCGCTGATGTCCGGCCGCGTCGACGTCGGCGTTGCCTCGACCTCGGATACGCTGGAGCGGGCCAAGACCGTCGGCATGACCGTTCCTTATTTCGCCTTCGAAATGGCCGTCACCTCCAACGACAAGTCGGGCATCAAGTCCTTCGAAGACATGAAGGGCAAGATCGTCGGCGCAACCGCCGGCACCTACGAGGCGATCGCGCTCGAAAAGCAGGTCAAGGAGTGGGGCACAGGCGAGTTTCGCCCGTATCAGACGCAGGCTGATGTCTTCCTGGCGCTGAGCCAGGGCCAACTCGATGCGACCGTTTCCACCTCGACCGTCGCCCAGGCAACCGTGAAATCAGGCAAATTCGCCGGCATCTCCGTCGTCGGCAAGGCACCGTTCCAGACGGATTACGTCTCTCTCTTCACTAATCGCGAAGAATACGGCCTCATCAACTATCTCAACCTCTTCATCAACCAGCAAGTCCGCACGGGCCGCTACGCCGAGCTCTACGAAAAGTGGGTCGGCGGCGCCCTGCCGTCCCTGACTGTCAATAGCGTCTATCGCTAA
PROTEIN sequence
Length: 269
MKKIVIAFGLLAAVTAITPAKADKLDDIISSGTLRCAVVLDFPPMGSRDANNNPIGFDVDYCNDLAKALGVTAEIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGMTVPYFAFEMAVTSNDKSGIKSFEDMKGKIVGATAGTYEAIALEKQVKEWGTGEFRPYQTQADVFLALSQGQLDATVSTSTVAQATVKSGKFAGISVVGKAPFQTDYVSLFTNREEYGLINYLNLFINQQVRTGRYAELYEKWVGGALPSLTVNSVYR*