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SCNpilot_expt_500_bf_scaffold_10820_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 2400..3176

Top 3 Functional Annotations

Value Algorithm Source
NADH-ubiquinone oxidoreductase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JBJ1_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 259.0
  • Bit_score: 434
  • Evalue 8.90e-119
  • rbh
putative monovalent cation/H+ antiporter subunit D; K05568 multicomponent Na+:H+ antiporter subunit D similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 259.0
  • Bit_score: 434
  • Evalue 2.80e-119
  • rbh
Cation:proton antiporter {ECO:0000313|EMBL:KEA07598.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 259.0
  • Bit_score: 434
  • Evalue 9.60e-119

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGGCTGGACCCACGGACACCGCAGTCGACCTCTCCCATGCGCTCGTTGCCGCGCCGATACCGATGGGGCATTGGCTGGTCGTCTTGCCGGTCGCCTTGTGCATCGGGCTCGGCGCGATCCTTCTGATGCTGCGCAACCGGACGGAGTGGCACGCCGCGATCGCCATTCCAGGCTTGGCGCTGCTGGTGCTGATCGATGCGGCCTTGCTCTATCGGGTCGCAAGCGAGGGAGCCGTGACCATGGTCATGGGACGATGGCTGCCGCCCTTCGGCATCGCCTTCAGCGTCGATATTTTCGGCGCGCTCATGGCCTTGACGGCGGCGATCGCAGCACTTGCGGCAAGTGTCTATTCGCTCGGTGAAATCACCGCGAGCGGTCGGCGATACGGCTTCTTCCCCTTCCTGTTGTTGCTGTTGGCCGGTGTCAGCGGTGCCTTCCTGACGGGCGATGTCTTCAACCTCTATGTCTGGTTCGAGGTGCTACTGATTTCGTCCTTCGGTCTGCTGATCCTTGGTTCGGAGCCGGAACAGATCGATGGCGCGCTGAAATATGCCGTGTTGAACCTGATCGCCACCACGCTCTTTCTCGTCTCCGTCGGCTATCTCTATGCCGTCTTCGGCACGCTCAACATGGCCGATATCGCCATGAAGGCGAAGGCGGGCGACGGCCATGCGCCGTTGATGACGCTGGCCGGCTTGTTCCTGCTCGCCTTCGGCATGAAGGCGGCGGCCTTCCCGGTCAATTTCTGGCTCCCGGCCTCCTATCATACGCCGCGC
PROTEIN sequence
Length: 259
MAGPTDTAVDLSHALVAAPIPMGHWLVVLPVALCIGLGAILLMLRNRTEWHAAIAIPGLALLVLIDAALLYRVASEGAVTMVMGRWLPPFGIAFSVDIFGALMALTAAIAALAASVYSLGEITASGRRYGFFPFLLLLLAGVSGAFLTGDVFNLYVWFEVLLISSFGLLILGSEPEQIDGALKYAVLNLIATTLFLVSVGYLYAVFGTLNMADIAMKAKAGDGHAPLMTLAGLFLLAFGMKAAAFPVNFWLPASYHTPR