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SCNpilot_expt_500_bf_scaffold_11533_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 2988..3314

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JLC2_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 108.0
  • Bit_score: 212
  • Evalue 3.00e-52
transcriptional regulator protein; K10947 PadR family transcriptional regulator, regulatory protein PadR similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 108.0
  • Bit_score: 212
  • Evalue 9.50e-53
PadR family transcriptional regulator {ECO:0000313|EMBL:KEA08462.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 108.0
  • Bit_score: 212
  • Evalue 4.20e-52

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGACTGACTCGATCCAAGTTCAACTGCGAAAAGGCGTGCTCGATCTCTGCGTCCTTGCCGTGCTCTCGCGGGGCGAGAGCTATGGCTACGAAATTGCGAGCACGCTGGTTGCGGCGGTCGGAATGGGTGAGGGAACGATCTACCCGCTGATGCGCAGAATGCAGAATGACGGTCTCGTTGCGACCCGCATCGTCGAGTCGAGCAATGGGCCACCGCGTAAGTACTACCGGCTCACGCCGCTGGGGCGCTCGATTTTCGAGGCTCATCGTCGCGACTGGCGCTCTCTTGCTGGCGCCGTCGACAAGCTACTTGAGGATTTGCCATGA
PROTEIN sequence
Length: 109
MTDSIQVQLRKGVLDLCVLAVLSRGESYGYEIASTLVAAVGMGEGTIYPLMRRMQNDGLVATRIVESSNGPPRKYYRLTPLGRSIFEAHRRDWRSLAGAVDKLLEDLP*