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SCNpilot_expt_500_bf_scaffold_13163_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(406..1353)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Rhizobium lupini HPC(L) RepID=K5CNH6_RHILU similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 273.0
  • Bit_score: 406
  • Evalue 1.90e-110
  • rbh
Putative transcriptional regulator {ECO:0000313|EMBL:EKJ94944.1}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium lupini HPC(L).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 273.0
  • Bit_score: 406
  • Evalue 2.60e-110
putative transcriptional regulatory protein, LysR family; putative OprD regulatory protein similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 273.0
  • Bit_score: 389
  • Evalue 9.70e-106
  • rbh

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Taxonomy

Rhizobium lupini → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGCTACGCGAAAACGTCACCGACCTGCTATTCTTTCTCGCCGTCGCCAGAGAACGGAGCTTTACGCGCGCTGCGGCCCAGCTCGGCGTTTCGCAATCGGCACTCAGCCACACGGTGCGGCAGCTCGAGGAGCGCATGGGCGTCCGACTTTTGACGCGCACCACGCGCAGCGTCAGCCCGACACCGGCGGGCGAGCGCCTGCTGCAATCACTGACGCCGCGCTTCCAGGAAATCGAAGCCGAACTCTTTGCCGTCACCGAGCTCCGAGAAAAGCCGGCGGGAACGATCCGTCTCACCTCGGTCGACTATGCTGTCGATACCTATATCTGGCCGAAGCTTGCCAGCGTGCTTAAGGATTATCCTGACATCCATGTCGAGATCATCAACGATTACGGCCTGACGGATATCGTCGCGGAGCGCTTCGACGCCGGCGTGCGCCTCGGCCAGACGGTTGCCAACGGCATGATTGCCGTCCGCATCGCGCCCGATGAGCCGTTTGCCGTGGTCGGTTCTCCATCCTATTTCGAGGGACGCACCAAACCAATCGTCCCTCAGGACCTGACCGCTCACACGTGCGTCAACCTGCGGCTCCCGACGCATGGCGGCAACTACGTGTGGGAGTTCGAAAGGGGCAACGAAGAACTGCGGGTGCGCGTGGACGGGCAAATCACGTTCAACGGTGTCAGGCAGGTGCTGGCCGCCGCCGTCGATGGTTACGGATTGGCCTATGCGCCCTACGGCCTGGTGCGGCCGCACATCGAAAGCGGCCGCCTCGTCCGCGTACTGGAGGATTGGTGCCCGCCATGGACGGGCTACCACGGTGGTGCTGGAGGCGTTGCGCTACCGCGGCTGAGGGCGGGACTTACGACGCCATCAGCGCGCGAATGCTGCGATCTGCCGATTGCAGCAGTTCGAAAGCTTCGTAGCGCCGCTCATGCAACGTCTTGA
PROTEIN sequence
Length: 316
MLRENVTDLLFFLAVARERSFTRAAAQLGVSQSALSHTVRQLEERMGVRLLTRTTRSVSPTPAGERLLQSLTPRFQEIEAELFAVTELREKPAGTIRLTSVDYAVDTYIWPKLASVLKDYPDIHVEIINDYGLTDIVAERFDAGVRLGQTVANGMIAVRIAPDEPFAVVGSPSYFEGRTKPIVPQDLTAHTCVNLRLPTHGGNYVWEFERGNEELRVRVDGQITFNGVRQVLAAAVDGYGLAYAPYGLVRPHIESGRLVRVLEDWCPPWTGYHGGAGGVALPRLRAGLTTPSARECCDLPIAAVRKLRSAAHATS*