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SCNpilot_expt_500_bf_scaffold_12548_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 4414..4692

Top 3 Functional Annotations

Value Algorithm Source
sodB; superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 93.0
  • Bit_score: 199
  • Evalue 5.40e-49
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 93.0
  • Bit_score: 199
  • Evalue 2.40e-48
Superoxide dismutase n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JBG0_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 93.0
  • Bit_score: 199
  • Evalue 1.70e-48

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGGCTTTCGAATTGCCTGCACTTCCCTACGATTACGACGCCCTTTCGCCCTTCATGTCGCGTGAGACCCTCGAGTATCACCACGACAAGCACCACAAGGCCTATGTCGACAACGGCAACAAGCTCGCTGCCGAAGCAGGTCTTTCCGATCTGTCGCTCGAAGAAATCGTGAAGAAGTCCTTCGGCACCAATGCAGGCCTCTTCAACAATGCAGCCCAGCACTACAACCACATCCATTTCTGGAAGTGGATGAAGAAGGGCGGCGGCGGCAACAAGCTG
PROTEIN sequence
Length: 93
MAFELPALPYDYDALSPFMSRETLEYHHDKHHKAYVDNGNKLAAEAGLSDLSLEEIVKKSFGTNAGLFNNAAQHYNHIHFWKWMKKGGGGNKL