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SCNpilot_expt_500_bf_scaffold_21500_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 2..643

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI00036BAF9F similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 213.0
  • Bit_score: 256
  • Evalue 2.10e-65
MFS transporter {ECO:0000313|EMBL:KFI31836.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 210.0
  • Bit_score: 319
  • Evalue 3.70e-84
arabinose efflux permease similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 211.0
  • Bit_score: 255
  • Evalue 1.50e-65

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Taxonomy

Haematobacter massiliensis → Haematobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
CTCTTCGTCTGGGTCGCGATCGGTCTTCCCGATTTTCCCGGCCAGACGGGCGACCAGCGCCGTTCATTGGCCGATGTCGTCAGGATTCCGGGCGTTCGGTCGGTGCTGCTGGCCACCTTTGCTTTCGTGCTCGCCCATAACACGCTCTACACCTATGTCGCGCCGTTTCTGGCACCGTCGGGGCTTGGCACGCATGTCGATCTGATCCTGCTCGTCTTCGGCCTCGTCGCGCTGGTGAGCATCTGGATCGTTGGCGTGCTGATCGACCGGTGGCTTCGTGAACTCGTGCTGGGGAGCATCGCGCTATTTATAGCGGCCGCATTCATCTTCGGCCTTCTCGCGACGAATGTTCCCGCGATCTTCGTCGGCATCGTGGCGTGGGGTTTGGCCTGGGGCGGTGCGCCGACCCTTTTCCAGACCGCATCGGCGAAGGCGGCGGGCGAGGCCGCCGACGTCGCTCAATCCATGATCGTCACAGTCTGGAACATCGCCATGGCCGGAGGCGGCATCGTTGGTGGGTTGCTGCTGGAGAACCTCGGTGTAGGCGCGTTCCCGTGGACGTTGATGCTGTTTCTCGTTGCCACGTTTGCCGTCGTCTGGATGGCGCGCCGGCACGGCTTTTCCCTTGCGCGGCTCCTCTGA
PROTEIN sequence
Length: 214
LFVWVAIGLPDFPGQTGDQRRSLADVVRIPGVRSVLLATFAFVLAHNTLYTYVAPFLAPSGLGTHVDLILLVFGLVALVSIWIVGVLIDRWLRELVLGSIALFIAAAFIFGLLATNVPAIFVGIVAWGLAWGGAPTLFQTASAKAAGEAADVAQSMIVTVWNIAMAGGGIVGGLLLENLGVGAFPWTLMLFLVATFAVVWMARRHGFSLARLL*