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SCNpilot_expt_500_bf_scaffold_31097_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(770..1141)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC-type transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2DY27_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 123.0
  • Bit_score: 244
  • Evalue 4.80e-62
putative (deoxy)ribonucleoside ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 123.0
  • Bit_score: 244
  • Evalue 2.00e-62
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAJ92119.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 123.0
  • Bit_score: 244
  • Evalue 6.70e-62

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
GGCTTGAACCCGATGAAGATCCGTTATGGCGCCATCATCGCCGGCAGCGCCCTGATGGGCATGGGCGGCGCCTTCCTAACGCTTTCCGCCTTCAACAGCTTCTTTCCGACCATGGTGCAGGGACGCGGCTGGATCTGTATCGCACTTGTCGTCTTTTCGTCCTGGCGGCCGGGTCGGGCGCTGTTCGGCGCCTTGCTCTTTGCCTTCTTCGACGCATTCCAGTTGCGCCTCCAGACCGCAGTCCAGGGCGTGCCCTATCAGATCTTCCTGATGACGCCCTACATCCTGTCCATCGTCGCCCTTGCCGTCATGAGCAGGCGAGCCCGCGTACCGCAGGCGCTGATGCAACCCTATCGCCGTGGCGAGAGATAA
PROTEIN sequence
Length: 124
GLNPMKIRYGAIIAGSALMGMGGAFLTLSAFNSFFPTMVQGRGWICIALVVFSSWRPGRALFGALLFAFFDAFQLRLQTAVQGVPYQIFLMTPYILSIVALAVMSRRARVPQALMQPYRRGER*