ggKbase home page

SCNpilot_expt_500_bf_scaffold_31098_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(3..1142)

Top 3 Functional Annotations

Value Algorithm Source
Putative restriction-modification (R-M) enzyme n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPI0_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 380.0
  • Bit_score: 688
  • Evalue 3.80e-195
putative restriction-modification (R-M) enzyme similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 380.0
  • Bit_score: 688
  • Evalue 1.20e-195
Putative restriction-modification (R-M) enzyme {ECO:0000313|EMBL:AGB73273.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 380.0
  • Bit_score: 688
  • Evalue 5.40e-195

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
AAAGGCGTCGATCCGAACGGCTCGCAGCGCGCCTGGGATCTCTATGTGAAGTCCCGCTTCATTGAGACGAAGAATCCGGGCCGTGCGCTCGTGCTCGCGTCGGGCACGCCGATCACCAATACCCTCGGCGAAATGTTCTCCGTGCAGCGGCTCATGGACCATGCGGCGCTGGCGCAGCGCGGTCTGCACGAGTTCGACGCCTGGGCATCGACCTTCGGCGACACCACGACCGAGCTCGAATTGCAGCCATCCGGCAAATACAAGCCGGTGTCGCGGTTCGCCAGCTTCGTCAACGTGCCGGAGCTTATCGCGATGTTCCGCAGCTTCGCCGACGTCGTCATGCCGGAGGATTTGCGTCAATTCGTCAGGGTGCCGGCGATCTCGACCGGCCGCCGGCAGATCGTCACGGCGAAGCCGACCGCCGCCTTCAAGCGCTACCAGCTTCAGCTCGATGCGCGCATCAAGGCGATCGAGCAGCGCAATCGGCCTGTCGGACCTGGCGACGACATCCTGCTGTCCGTCATCACCGACGGGCGTCATGCGGCGATCGATCTTCGCCTGGTCGATGCGGACAACGACAATGAGCCCGGCAACAAGCTCAATATGATGATCGACACCGCCTTCCGCATCTGGCGGGAGACCGAAGCGAGTACCTATGTTCAGCCGGACGGCAGGCCCTATGAGCTACCCGGCGCCGCGCAGATGATCTTTTCTGATCTCGGCACGATCAATGTCGAGAAGACCAGAGGCTTCTCGGCCTATCGCTGGATCAGGGACGAGCTCATCCGGCGCGGCGTGCCAGCCGCCGAAATCGCCTTCATGCAGGACTTCAAGAAGTCGGAGGCGAAGCAGAGGCTGTTCGGCGACGTGCGTGCCGGCAGGGTCCGCTTCCTTCTCGGAAGCTCGGAGACGATGGGCACCGGCGTCAACGCGCAATTGCGCCTGAAGGCGCTGCATCACCTCGACGTGCCGTGGCTGCCCTCGCAGATCGAGCAGCGCGAGGGCCGCATCGTTCGCCAGGGCAACCAGCACGACGAGGTTGATATCTACGCCTACGCGACGGAGGGCTCGCTCGATGCCGCAATGTGGCAGAACAACGAGCGCAAGGCCCGTTTCATCGCGGCCGCGCTCTCCGGCGAT
PROTEIN sequence
Length: 380
KGVDPNGSQRAWDLYVKSRFIETKNPGRALVLASGTPITNTLGEMFSVQRLMDHAALAQRGLHEFDAWASTFGDTTTELELQPSGKYKPVSRFASFVNVPELIAMFRSFADVVMPEDLRQFVRVPAISTGRRQIVTAKPTAAFKRYQLQLDARIKAIEQRNRPVGPGDDILLSVITDGRHAAIDLRLVDADNDNEPGNKLNMMIDTAFRIWRETEASTYVQPDGRPYELPGAAQMIFSDLGTINVEKTRGFSAYRWIRDELIRRGVPAAEIAFMQDFKKSEAKQRLFGDVRAGRVRFLLGSSETMGTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVRQGNQHDEVDIYAYATEGSLDAAMWQNNERKARFIAAALSGD