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SCNpilot_expt_500_bf_scaffold_855_22

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(26489..27040)

Top 3 Functional Annotations

Value Algorithm Source
DNA binding response regulator PrrA (RegA) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8J1_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 184.0
  • Bit_score: 286
  • Evalue 1.60e-74
Chemotaxis protein CheY {ECO:0000313|EMBL:KKB76372.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 183.0
  • Bit_score: 343
  • Evalue 2.10e-91
DNA binding response regulator PrrA (RegA); K15012 two-component system, response regulator RegA similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 184.0
  • Bit_score: 286
  • Evalue 5.10e-75

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGAGTACGATCGAAGATCTTCTGGCTGCCGATCCGAGCCTCCTGCTCGTCGACGACGACGCGGCCTTTCTGACCCGCCTCGAGCGCGCCATGGCGCGCCGCGGCTTTGAAGTGCGTATCGCCGGCACAGTGGCGGCAGGCTTGGCGGCCGTCAGCGAACGTCCCCCTGCTTATGCGGTGGTGGATCTGCGCCTGGAAGACGGCAATGGCCTCGACGTGGTCTCGGCCCTGCACCAGAAGCGCCCCGAGGCGCGCGCCGTTGTCCTCACCGGCTATGGCAACATCGCCACCGCGGTGACCGCAGTCAAGCTGGGCGCCATGGATTATCTCAGCAAGCCAGCTGACGCCGACGACGTCATCAACGCGCTGCTGGCCACGGGCGAAGACAAGCCGGAGCCGCCGGAAAATCCGATGTCGGCCGACCGGGTCCGCTGGGAGCATATCCAGCGCGTCTACGAACTTTGTGACCGCAATGTTTCGGAAACCGCGCGCCGGCTCAACATGCACCGCCGCACCCTGCAGCGCATTCTGGCCAAGCGCGCGCCGCGCTGA
PROTEIN sequence
Length: 184
MSTIEDLLAADPSLLLVDDDAAFLTRLERAMARRGFEVRIAGTVAAGLAAVSERPPAYAVVDLRLEDGNGLDVVSALHQKRPEARAVVLTGYGNIATAVTAVKLGAMDYLSKPADADDVINALLATGEDKPEPPENPMSADRVRWEHIQRVYELCDRNVSETARRLNMHRRTLQRILAKRAPR*