ggKbase home page

SCNpilot_expt_500_bf_scaffold_3707_4

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 1893..3182

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG79_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 427.0
  • Bit_score: 602
  • Evalue 2.40e-169
  • rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KFL29920.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 429.0
  • Bit_score: 783
  • Evalue 1.40e-223
branched-chain amino acid transport system permease protein LivM; K01998 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 427.0
  • Bit_score: 602
  • Evalue 7.60e-170
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGATCGCTCGTTCCCTCTCGCTGTTTGGCGGCCTGTTCGTGCTCATCCTGGTGATCGGCTGGGTCATGGGCGCGCCCTTTACCTCCTCGCGCCTGGTGGAAGCGGCCGCCTATGCGCTCATCGCCCTCGGCCTCAATATCCAGTGGGGTTATGGCGGCCTGTTCAATTTCGGCATTATGGGCTTCCTGATGGTGGGCGGCGCTGCCGTCACCTTCATATCCTATCCGGTCAATGCAGTGTTCTGGGGCTCGGAAGGTCCGGCCATGCTGGGGCGGGCGCTGCTGGCCTTCTTTGTGGGCGCGTTGATCGTGCTCGCCGCGCGGCAGAGCCATCGCGTCGGTATCACCGGCAAATGGAAGATGGCGCTCACCGTACTCGCCTGGTTCCTGGCCTATGTGCTCTATCGCAGCCAGCTCGATCCGGCCGCGGCCTATATCGAAAGCGCCGCCGGTGGCGGCTGGGTCGGCGGGCTGGGTGCCCATCCACTCTTGGGCTGGGTGTTCGGTGGGGTTCTGGCTGCCGGCATCGCCTATGTCATCGGCAAGATCTGCCTTGGCCTGCGCACCGATTATCTGGCCATTGCCACGATCGGTATTTCCGAGATCCTGCGCGCGCTGATCAAAAACATGGACTGGCTGACCCGCGGTACGCTCACCGTCTCGCCCATTCCATGGCCGACGCCCCTGCCACAAGCCTACCAGGCGCAGGGCCTGGACACCGCCACGGCGCTGATCGCGGCTCGCGCCGGCTATCTGGCCTTGGCTGTATTGGTGCTGGCGATTGTCGTCTGGCTGATCTCGCGCGCCTATGCCGGGCCCTGGGGCCGGATGATGCGCGCCATCCGCGACAACCACATTGCCGCCTCCTCGATGGGCAAGAATGTTACGGCCCGCCAGCTCGAGATTTTCGTCTTCGGCTCGGTGCTGATGGGCATTGGCGGCGCCATGCTGGTCAGCTTCGTGCAGATTTTCGATCCCTCCAGCTACCAGCCGATCAACCACACATTCCTGATCTGGGTGATGGTGATCGTGGGCGGCGCTGGTAATAATTGGGGTGCGATCTTCGGGGCGGTGCTGATCTGGCTGATCTGGGTCATTTCCGAACCGCTGTCCAAGGCGATCTTCGACTTTGTCAGCACCTGGTCCAGCCATGCCGGCTGGGGGGCCATTCCCGATATCGAGGCCCGTTCGGCGCAAATGCGGGTTTTCGTGCTGGGCCTGGTCATTACCATCGCCCTGCGCTTCGCGCCGAAGGGATTGATCCCGGAAGTGGTCAAGCGCGATAATTAA
PROTEIN sequence
Length: 430
MIARSLSLFGGLFVLILVIGWVMGAPFTSSRLVEAAAYALIALGLNIQWGYGGLFNFGIMGFLMVGGAAVTFISYPVNAVFWGSEGPAMLGRALLAFFVGALIVLAARQSHRVGITGKWKMALTVLAWFLAYVLYRSQLDPAAAYIESAAGGGWVGGLGAHPLLGWVFGGVLAAGIAYVIGKICLGLRTDYLAIATIGISEILRALIKNMDWLTRGTLTVSPIPWPTPLPQAYQAQGLDTATALIAARAGYLALAVLVLAIVVWLISRAYAGPWGRMMRAIRDNHIAASSMGKNVTARQLEIFVFGSVLMGIGGAMLVSFVQIFDPSSYQPINHTFLIWVMVIVGGAGNNWGAIFGAVLIWLIWVISEPLSKAIFDFVSTWSSHAGWGAIPDIEARSAQMRVFVLGLVITIALRFAPKGLIPEVVKRDN*