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SCNpilot_expt_500_bf_scaffold_3518_11

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 12233..13033

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGQ0_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 265.0
  • Bit_score: 405
  • Evalue 3.50e-110
  • rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 266.0
  • Bit_score: 478
  • Evalue 7.80e-132
ABC-2 type transporter; K09686 antibiotic transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 265.0
  • Bit_score: 405
  • Evalue 1.10e-110
  • rbh

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Taxonomy

Devosia epidermidihirudinis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
TTGGGCTTGCTTGGGGGAATTTACGCGATCTGGCTGCGCGAAGTGAAGCGCGCCCTGCGCGACCGCGGCCAGCTGATCGGCGGCATCAGCCGGCCACTGATGTGGGTGCTGATCATGGGCATCGGCCTCAATCCCTATTTTCGGGGCGAGGTCTTCGGCGAAGTGCGTTTTGCGGTGCCCTATACCTATATTCAGTTCATTTTCCCGGCCATTGTCGTCCTCAATATCATGTACACGTCCGTCCAGTCGGCAGTGTCGGTGATCTGGGACCGCGAATTCGGCTTCCTGCGCGAGGTCCTGGTGTCCCCACTACCCCGCTGGGCCGCGCTCCTCGGCAAGATCCTCGGTGGCACTACCATCGCCGTGTTCCACGGCTCCCTGGTGCTCGTCCTTGCGGCCTTCGCCGATGTGGTGATCACTTGGGATCGCCTGCTGATCGGGCTGGGCCTGATGTTCCTTCTCGCCTTCGGCCTGACCTCGTTTGGCGTCGTGCTCGCCTCCCGCATTCGCAGCTTCGAAGGTTTCGGCGTCTTCTCCAACGCCATCATCCTGCCGCTCTATTTTCTCTCCAGCTCGGTTTTTCCCCTCGATCCGGCGCTGACACGGGCACAAACGCTGGTGGTCTACCCGGAATGGCTGGTCACGCTGGTGGAATGGAACCCCGTCACCTATGCGGTCGACGCCATGCGCGGCACCTTCATCCAGTTCCACCAGTTCGACCCCGCCATCGGCCCGATTCTGCTTGCCGCCATGGCCGTTGGGTTCTTCATCTGGGCCCTGCTCGATTTCCGGAAAGCCTGA
PROTEIN sequence
Length: 267
LGLLGGIYAIWLREVKRALRDRGQLIGGISRPLMWVLIMGIGLNPYFRGEVFGEVRFAVPYTYIQFIFPAIVVLNIMYTSVQSAVSVIWDREFGFLREVLVSPLPRWAALLGKILGGTTIAVFHGSLVLVLAAFADVVITWDRLLIGLGLMFLLAFGLTSFGVVLASRIRSFEGFGVFSNAIILPLYFLSSSVFPLDPALTRAQTLVVYPEWLVTLVEWNPVTYAVDAMRGTFIQFHQFDPAIGPILLAAMAVGFFIWALLDFRKA*