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SCNpilot_expt_500_bf_scaffold_4512_28

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 29886..30695

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, LysR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERQ8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 261.0
  • Bit_score: 316
  • Evalue 2.20e-83
  • rbh
LysR family regulatoy protein {ECO:0000313|EMBL:KFC61341.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 269.0
  • Bit_score: 444
  • Evalue 1.30e-121
LysR family regulatoy protein similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 265.0
  • Bit_score: 305
  • Evalue 2.00e-80
  • rbh

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
GTGAGCCGGCGGGTATCCGATCTCGAGGCCCGGCTGGGCGTGGTCCTGTTCGACCGCTCCGCCCATGGCGTCAAACTGACACTGGCGGGCGAAGCCTATGCCGAGGGTTGCCGCACCGTGCTGCGCGCCATTGCCGATCTCGATGCCGTCATGGCCGATTTCGGCTCGGGCCATCGCGGCAGCCTGCGCCTGGCCTGCACCGGTTCGGCTCTCACCGGCCGCCTGCCGGAGCTGCTAGCCCGCTATGCCGGCAAATATCCGGGCATCGATATCGCCATCGCCGAAATGGGCGCGGCCAAGGCATTGCTGGCGCTCGACGAAGGCCGTGCCGATGTCGCTATCGTCTCGGACAATTACGACTTCACCCGCTTCGACATCCGTCCCTTTGAGGATGAGCGCATCTGGGTGCTGGCCCCGCCTGACCACCCGCTCGCCGCCCAGATCGAGCCACGCAAGTCGCTGTCGTTTGATGCGGTCACGCCCCACGCCATTGTCGGCGTGCATCACAGCGGCTCGCTCGACCGCCTGCTGGCCGAAGCGGCGGCCAAGGCGGGGCGCCCGCTCGACGAAGCCCTGCGGGTCGAGAGTTTTCCGGCGCTGGTGCGCATGGTGGAAGCCGGCTTCGGCATCGGCTTCCTGCGCTCGACGAGCCTCCATCTCCTCGCCGGTACTGACCTCGTCTGCGCACCCCTGGCCGAGACCTGGGCCATGCGCCAGCTGCTGGTGGCGCGACGCAAGTCGAGCCCCCTATCAGCGGCGATGAAGAGTTTCATCCAGCTCTGCGACGAGACCTATCTGCCCTCCGCCTGA
PROTEIN sequence
Length: 270
VSRRVSDLEARLGVVLFDRSAHGVKLTLAGEAYAEGCRTVLRAIADLDAVMADFGSGHRGSLRLACTGSALTGRLPELLARYAGKYPGIDIAIAEMGAAKALLALDEGRADVAIVSDNYDFTRFDIRPFEDERIWVLAPPDHPLAAQIEPRKSLSFDAVTPHAIVGVHHSGSLDRLLAEAAAKAGRPLDEALRVESFPALVRMVEAGFGIGFLRSTSLHLLAGTDLVCAPLAETWAMRQLLVARRKSSPLSAAMKSFIQLCDETYLPSA*