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SCNpilot_expt_500_bf_scaffold_4245_16

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 12095..12403

Top 3 Functional Annotations

Value Algorithm Source
pcaG; protocatechuate 3,4-dioxygenase alpha chain (EC:1.13.11.3); K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 84.0
  • Bit_score: 113
  • Evalue 3.30e-23
protocatechuate 3,4-dioxygenase subunit alpha n=1 Tax=Rhizobium leguminosarum RepID=UPI0003829BBB similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 88.0
  • Bit_score: 114
  • Evalue 6.20e-23
Protocatechuate 3,4-dioxygenase {ECO:0000313|EMBL:KKB82608.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 82.0
  • Bit_score: 130
  • Evalue 1.50e-27

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGAAACTGCACCCCGTTCCCGTGCTCAAGGAATCGCCGTCCCAGACCGCCGGCCCCTATGTGCATATCGGCATGACCCCGAATTTCTGCGGGATCACTGGCGTGATCGACGCCGATCCCGGCATCACCATGCTGACGCCCGAAGCCAAGGGCGAGCGCATCACCATTACCGGCCGGGTCATCGACGGCTCCGGCGCGCCGGTCAATGACGCGGTGCTCGAGCTCTGGCAGGCCGACCGTCCCCGCCTTTACCGGCTGGGGCCGCCAGCCGACCCGGCCCGACGGCACCTTCAGCTTCGAAACCATTAA
PROTEIN sequence
Length: 103
MKLHPVPVLKESPSQTAGPYVHIGMTPNFCGITGVIDADPGITMLTPEAKGERITITGRVIDGSGAPVNDAVLELWQADRPRLYRLGPPADPARRHLQLRNH*