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SCNpilot_expt_500_bf_scaffold_4466_2

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 360..1268

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REG6_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 299.0
  • Bit_score: 384
  • Evalue 1.20e-103
  • rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 301.0
  • Bit_score: 488
  • Evalue 6.50e-135
tyrosine recombinase XerD; K04763 integrase/recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 299.0
  • Bit_score: 384
  • Evalue 3.90e-104
  • rbh

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGAGCGGGGCGCATCTGGTCGGCGCCTTCCTCGAAATGATGAGCGCCGAGCGCGGGGCCGCCGCCAATACGATCGAAGCCTATCGCCGCGATCTCAGCGATTATTCGGGCTTCGTCGCCGGCCGGGGACAGAGCCTGCTCGATTGTCCGCGCGATACCGTCACCGCCTATCTCGAAAATCTCAAGCTAGAGGGGCTGTCTGCCTCCTCCAGCGCTCGCCGGCTTTCGGCCATACGACAATTGCACAAGTTTTTGTGTGCCGATGGACTGCGCGGGGATGATCCCACGCGGATCGTCGCCAGCCCCAAGCCGCGACGCGCCCTGCCCAAGGTGCTTTCGGTTGCCGAGGTCGATCGCCTGCTCACCCTGGCTGAAACCGAAGCCAATGCGCCGGCCAGCCCGGCCAAGCAATTGGCGGCGCGCCGGCTCTATTGCCTGCTCGAAATGCTCTATGCCACCGGGCTGCGCGTCAGCGAACTGGTGAGCCTCAGGCGCAATGCGGTGATGCGCGATGCCAGTTTCATCACCGTCATCGGCAAGGGCAGCAAGGAGCGCATCGTGCCGATGAACGACCGGGCGCGCGATGCCGTACGCGCCTGGGTCGAGACGCTGCCGCCGGGGCCCTGGCTGTTTCCGGCCAATGGCGAGGACGGCTATCTCGCGCGGCAGGTTTTTGCGCGTGATCTCAAGGGGCTGGCGGGGCGGGCCGGCATCAGTGCGGCGCGGGTGGCGCCCCATGTGCTGCGCCACGCCTTTGCCAGCCATTTGCTGGCTGGCGGCGCCGACCTGCGCGTGGTGCAGATGCTGCTCGGCCATGCCGATATTTCCACCACGCAGATCTATACCCATGTGCTGGATGAGAAACTGCGCAATCTGGTGGAGCAACACCACCCGCTGGCGCAGGAATAG
PROTEIN sequence
Length: 303
MSGAHLVGAFLEMMSAERGAAANTIEAYRRDLSDYSGFVAGRGQSLLDCPRDTVTAYLENLKLEGLSASSSARRLSAIRQLHKFLCADGLRGDDPTRIVASPKPRRALPKVLSVAEVDRLLTLAETEANAPASPAKQLAARRLYCLLEMLYATGLRVSELVSLRRNAVMRDASFITVIGKGSKERIVPMNDRARDAVRAWVETLPPGPWLFPANGEDGYLARQVFARDLKGLAGRAGISAARVAPHVLRHAFASHLLAGGADLRVVQMLLGHADISTTQIYTHVLDEKLRNLVEQHHPLAQE*