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SCNpilot_expt_500_bf_scaffold_4966_1

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 3..632

Top 3 Functional Annotations

Value Algorithm Source
response regulator n=1 Tax=Pseudomonas pelagia RepID=UPI000399FAB4 similarity UNIREF
DB: UNIREF100
  • Identity: 31.0
  • Coverage: 187.0
  • Bit_score: 70
  • Evalue 2.70e-09
Uncharacterized protein {ECO:0000313|EMBL:KFL32724.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 209.0
  • Bit_score: 376
  • Evalue 2.50e-101
AraC family transcriptional regulator; K02854 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 200.0
  • Bit_score: 63
  • Evalue 8.10e-08

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ACGCTCAGCGCCCCCGGCGGAATACTGATCCTGCCGAACACACCTTTCTCCGGCACCACCATAGGCGGCTTCGCAACCGCCTCGATCTGCCACTTCACCATGGCCAGCGCGCAAACCAGCGATCCCGGCTATCTCCTGCCCCGCCCCGGCGAAGCCATGCACGTCCAATCCATGCTGCGCCTGAGCCTCGATCTCGCCAACACGACCACGACGGTGGACCTGCAACGCCGCCATCGGCTCCTCCTCGCGATACTCGATTGTTTCGATCACCCAGCCGCCACGTACAACGAGCCTGCACCCAGCGATGACGGCCTCGACATGGCCTGGGGGCAGGCAACAAAGTCACTCCACAAGATGCGCACCCTCAGCGACGTCGCCGCGGTAATGGGCGTCCATGAAAGCGCTCTGCGCGCCCGACATCGCCGCCAATACCACACCTCTGCCGGCAGCCACCTGCGCGAAATGCGCCTACGCCGTGCCGAGGACCTGCTTTCGACCACCCGCTACACGCTGGGCGAAATCGCCCGCCTCGTCGGCTATGGCCACGCCGAGACCTTCATCGCCGCCTTTCATCGCAGCCGTGGCTGCACCCCCGGCGAATTCCGCCACCGCTCCAATCCCTTTGCCTGA
PROTEIN sequence
Length: 210
TLSAPGGILILPNTPFSGTTIGGFATASICHFTMASAQTSDPGYLLPRPGEAMHVQSMLRLSLDLANTTTTVDLQRRHRLLLAILDCFDHPAATYNEPAPSDDGLDMAWGQATKSLHKMRTLSDVAAVMGVHESALRARHRRQYHTSAGSHLREMRLRRAEDLLSTTRYTLGEIARLVGYGHAETFIAAFHRSRGCTPGEFRHRSNPFA*