ggKbase home page

SCNpilot_expt_500_bf_scaffold_7638_5

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 4260..4793

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB37_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 175.0
  • Bit_score: 226
  • Evalue 1.90e-56
Diguanylate cyclase {ECO:0000313|EMBL:KFL28155.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 178.0
  • Bit_score: 295
  • Evalue 4.80e-77
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 175.0
  • Bit_score: 226
  • Evalue 6.10e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGCGTCACTTTCTCGCCGCCGCGATCTCCCTGGCCGTCGCCTTCCTCTGCCTCACTTCAGCGTGGGCCTTCGAGGTCATTTCCGTTCCCGAGGACGTCAACGCCGTCAATCTCTCCGCCGTGGTCGAGATCGTGCCGGGCCAGGATGGCCGCGTGCAATTGTCGACCGCGCCGGACTCGACCGGCATCATCCGTCGCATCGAAGTGCTGGCGGCCGAGCAGGGCACGAACCCTGCCTTTGCGCTGATCGCACTGCGCAATGACAGCGACCAGCAGATCGAGCGTCTGCTCGTCGCGCCCTTCTTCCGTCTGCCGGGTTCCGGCGTGTTCCAGCCAGATCTAGGCGAAGGCCGCGTCACTGCCGTAACGCCCAGCGCCGGCATCCGCCCGGTCCGCCTCGCCGATCCGGAAGCCGATGTTTTTGAGGTAACGCTCGATCCGGGCTCCACCGTTACCCTCGTTGCTGAGCTGACGTCAGGCAATCTGCCCGAACTCTACCTCTGGCAACCCAATGCCTATCGGGACTATGTGAAT
PROTEIN sequence
Length: 178
MRHFLAAAISLAVAFLCLTSAWAFEVISVPEDVNAVNLSAVVEIVPGQDGRVQLSTAPDSTGIIRRIEVLAAEQGTNPAFALIALRNDSDQQIERLLVAPFFRLPGSGVFQPDLGEGRVTAVTPSAGIRPVRLADPEADVFEVTLDPGSTVTLVAELTSGNLPELYLWQPNAYRDYVN