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SCNpilot_expt_500_bf_scaffold_17723_3

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(774..1055)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9D6_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 91.0
  • Bit_score: 178
  • Evalue 2.40e-42
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 93.0
  • Bit_score: 185
  • Evalue 4.80e-44
Integration host factor beta subunit; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 91.0
  • Bit_score: 178
  • Evalue 7.70e-43

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGATCAAGTCGGAACTTGTCGAGAAGCTCGCCGCGGAGAACCCGCACCTGTTTCAGCGCGACATCGAAAACATCGTCAATGCCATCCTCGATGAGATCGGCGACGCCATGGCGCGCGGCGATCGGGTGGAGTTGCGCGGCTTCGGTGCCTTCTCGGTCAAGAACCGCCCCGCCCGTGTCGGCCGCAATCCCCGCACCGGCGAACAGGTCGATGTGGGCGAGAAATATGTGCCGCAGTTCAAGGCGGGCAAGGAAATCCGCGAGCGGCTGAACAAGTCCTGA
PROTEIN sequence
Length: 94
MIKSELVEKLAAENPHLFQRDIENIVNAILDEIGDAMARGDRVELRGFGAFSVKNRPARVGRNPRTGEQVDVGEKYVPQFKAGKEIRERLNKS*