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SCNpilot_expt_500_bf_scaffold_4017_4

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: 2016..3497

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein n=1 Tax=Afipia birgiae RepID=UPI000308DB77 similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 493.0
  • Bit_score: 739
  • Evalue 2.50e-210
  • rbh
PAS domain S-box protein {ECO:0000313|EMBL:EKS36780.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 493.0
  • Bit_score: 738
  • Evalue 5.90e-210
methyl-accepting chemotaxis receptor; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 493.0
  • Bit_score: 702
  • Evalue 1.10e-199

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1482
ATGCATTTGTTTGGCAAGGCGCGCGAGCTGGCTGCACAGGCTCAGGCACTCGACAAATCGCAGGCCCTGATCGAGTTCGATCTGGACGGCACCATCCTCACCGCGAACCAGAATTTCCTCAACGCGGTGGGTTATCGCCTCGAAGAAGTCCAGGGCAAGCACCACAGCATTTTCGTTCCGGCCGAGGTCCGCGAGAGCGCCGACTACCGCGAATTCTGGGCAGCGCTGCGTCGCGGCGAACATCAAGCGCGCGAATTCAAGCGGATCGCCAAGGGCGACCGGGAGATCTGGATTCAGGCCTCTTACAATCCGTTGCTCGACGCGAAGGGCAAGCCTTTCAAGATCGTCAAGTTTGCAACGGATATCACCCGCCAGAAACTGCAAAGCATCGAGCATACGGGACAGATCGAGGCGATTCAGAAATCGCAGGCGGTGATTCACTTCACGCCGGATGGAACGATCCTCGATGCCAACGACAATTTCCTGAAGGCGTTGGGTTATGATCTGCCAGAGATCCGGGGACAGCATCACAGCATGTTCATCGAGCCCGATCATCGCGACAGCCCCGCCTATCGCGCGTTCTGGGATTCACTGCGTCGCGGCGAGTATCAGGCCGCCGAATACAAGCGGATCGGCAAGGGCGGCAGGGTTGTCTGGATTCAGGCATCCTACAATCCGATCCCGGATGGCGATGGCCGTATTTGCAAGGTGGTGAAGTTCGCCACCGATGTCACGATGCAGGTCGAGGATCGCTTGCGGCGTGTGGAGGCGCAGAAGGTGATCGATCTCGATCTTGGTCTGATTACCGACGCCATGACGAAGACCACGGCGCAGGTGGCGTCCGCGGCAAGCGCGTCGACGCAGACATCGGCGAACATGCAGGCGGTCGCTTCGGGCGCCGAGGAATTGGCGGCCTCGGTCGGCGAAATCAGCCGGCAGGCATCGGATGCGCTGACCATCTCGATGCAGGCGGTGACGCAGGCCAACGAAACCAGCGCCATCGTCTCGGGACTCGCCACCGCCGCGCAACGCATCGGCGATGTCGTTAAGCTCATCAACAACATCGCCGATCAGACCAATCTGCTGGCGCTCAATGCGACGATCGAAGCGGCGCGTGCCGGCGAAGCGGGGCGGGGGTTTGCCGTCGTCGCGTCCGAGGTCAAAAGCCTTGCCGCGCAAACCGCCAAGGCCACCGAAGACATCAGCGCGCAGATCGCCGAAGTGCAAAGCACGACGACCAACGCCGTCGGCGTGATCGAAGCGATCACCCAAACCATCTCGCGGGTCAACGAAATTTCAGCGGCAATTGCCGCCTCGGTCGAGGAACAGGCATCGGTCACGCAAAGCATCTCGGCAAACATGCAGGTGGCCGCGAAGGGTGTTACCGAAGTCAACGCCAGTCTCAACGAAATCACCGGTTCGGCGAATTCCGTCGACGAGGCCACCCGCAAGGTCAAGGAGGCCTCGCGCGCGCTGGCATAA
PROTEIN sequence
Length: 494
MHLFGKARELAAQAQALDKSQALIEFDLDGTILTANQNFLNAVGYRLEEVQGKHHSIFVPAEVRESADYREFWAALRRGEHQAREFKRIAKGDREIWIQASYNPLLDAKGKPFKIVKFATDITRQKLQSIEHTGQIEAIQKSQAVIHFTPDGTILDANDNFLKALGYDLPEIRGQHHSMFIEPDHRDSPAYRAFWDSLRRGEYQAAEYKRIGKGGRVVWIQASYNPIPDGDGRICKVVKFATDVTMQVEDRLRRVEAQKVIDLDLGLITDAMTKTTAQVASAASASTQTSANMQAVASGAEELAASVGEISRQASDALTISMQAVTQANETSAIVSGLATAAQRIGDVVKLINNIADQTNLLALNATIEAARAGEAGRGFAVVASEVKSLAAQTAKATEDISAQIAEVQSTTTNAVGVIEAITQTISRVNEISAAIAASVEEQASVTQSISANMQVAAKGVTEVNASLNEITGSANSVDEATRKVKEASRALA*