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SCNpilot_expt_500_bf_scaffold_5781_4

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(2654..3583)

Top 3 Functional Annotations

Value Algorithm Source
Auxin Efflux Carrier n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QIV0_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 294.0
  • Bit_score: 441
  • Evalue 5.10e-121
Malonate transporter {ECO:0000313|EMBL:KIZ45497.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 294.0
  • Bit_score: 465
  • Evalue 6.10e-128
auxin efflux carrier; K07088 similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 294.0
  • Bit_score: 441
  • Evalue 1.60e-121

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGATCGATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATGGCGGAACCTGCCGGAATCCGGGCTCGCCTGGATGAATTTCTTCGTGCTTTACGTCTCTCTTCCGGCGCTATTTTTCCGCATTATGTCGCGGACCCCGTTCGAGGAACTCGCCAATCCGCCGTTCGTGATCGCCACCACCGCGGCAACGGCTGCGGCTTTCTTCCTGTCTGCCATCGTCGGCAAATTGATCGGGCGGCTACCGCTTCGCGAAGCGGCGATGGCCGGGCTGGCCGGCGGTTACGGCAACATCGGCTACATGGGGCCGGCGCTGGCCTTGGCCCTGTTCGGTCTGCCATCGGCGGTGCCGACCGCGCTGATTTTCTGCTTCGACAGTATCTTCCTGTTTTCGGTGATTCCATTGTGGATGGCGCTGACCGATGGAACACGCCGGCCGCTACTGCCGACGCTGTGGTTCGTCGTCAAGGAGATCGTGCTGCATCCGCTGATCGTCGCCGTTTATTGCGGAGCGTTGGCGGCTGCGTTTCACCTGCAGCTGCCGGTGGCGCTCGACAGCATGTTGCAGTTCCTGCAAAGCTCGGCGGCGCCGGTCGCACTGTTCGTACTCGGCGTTACCGTCGCGCTGCGGCCGTTGGGGCGCGTGCCGTGGGAAATTCCCGGTCTCGTGCTGATCAAGCTTGTGATCCATCCGATACTGGTGTTCGCGCTGGTGTGGTGGCTCGGACCGTTCACGCCGGAATGGTCGGCCACGGCCGTGTTGATGGCGTCGCTGCCGCCAGCGTTGAACGTGTTCGTCATCGCCCGGCAGTATGACACCTGGACCGAACCTGCGTCGGTTGCGGTTCTGATCGGGACGTTCGTGTCGGTGGTGACGTTGACCAGCGTGATGTACCTGATCAAGACCGGCCAGATCGCCTTCTAG
PROTEIN sequence
Length: 310
MIDXXXXXXXXXXXXKWRNLPESGLAWMNFFVLYVSLPALFFRIMSRTPFEELANPPFVIATTAATAAAFFLSAIVGKLIGRLPLREAAMAGLAGGYGNIGYMGPALALALFGLPSAVPTALIFCFDSIFLFSVIPLWMALTDGTRRPLLPTLWFVVKEIVLHPLIVAVYCGALAAAFHLQLPVALDSMLQFLQSSAAPVALFVLGVTVALRPLGRVPWEIPGLVLIKLVIHPILVFALVWWLGPFTPEWSATAVLMASLPPALNVFVIARQYDTWTEPASVAVLIGTFVSVVTLTSVMYLIKTGQIAF*